RNA–Protein interactions for RNA: ENST00000428163.5

BUD23-205, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-205ENST00000428163 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
BUD23-205ENST00000428163 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
BUD23-205ENST00000428163 ABCC9O60706 1549 aa30.25■■■□□ 2.43
BUD23-205ENST00000428163 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
BUD23-205ENST00000428163 NACADO15069 1562 aa28.83■■■□□ 2.21
BUD23-205ENST00000428163 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
BUD23-205ENST00000428163 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
BUD23-205ENST00000428163 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
BUD23-205ENST00000428163 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
BUD23-205ENST00000428163 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
BUD23-205ENST00000428163 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
BUD23-205ENST00000428163 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
BUD23-205ENST00000428163 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
BUD23-205ENST00000428163 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
BUD23-205ENST00000428163 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
BUD23-205ENST00000428163 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
BUD23-205ENST00000428163 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
BUD23-205ENST00000428163 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
BUD23-205ENST00000428163 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
BUD23-205ENST00000428163 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
BUD23-205ENST00000428163 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
BUD23-205ENST00000428163 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
BUD23-205ENST00000428163 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
BUD23-205ENST00000428163 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
BUD23-205ENST00000428163 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
BUD23-205ENST00000428163 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
BUD23-205ENST00000428163 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
BUD23-205ENST00000428163 NESP48681 1621 aa26.1■■□□□ 1.77
BUD23-205ENST00000428163 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
BUD23-205ENST00000428163 WIZO95785 1651 aa26.02■■□□□ 1.76
BUD23-205ENST00000428163 CUX2O14529 1486 aa26.01■■□□□ 1.75
BUD23-205ENST00000428163 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
BUD23-205ENST00000428163 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
BUD23-205ENST00000428163 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
BUD23-205ENST00000428163 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
BUD23-205ENST00000428163 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
BUD23-205ENST00000428163 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
BUD23-205ENST00000428163 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
BUD23-205ENST00000428163 DNAJC5Q9H3Z4 198 aa25.7■■□□□ 1.7
BUD23-205ENST00000428163 CFTRP13569 1480 aa25.6■■□□□ 1.69
BUD23-205ENST00000428163 MRC2Q9UBG0 1479 aa25.55■■□□□ 1.68
BUD23-205ENST00000428163 WDR62O43379 1518 aa25.52■■□□□ 1.68
BUD23-205ENST00000428163 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
BUD23-205ENST00000428163 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
BUD23-205ENST00000428163 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
BUD23-205ENST00000428163 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
BUD23-205ENST00000428163 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
BUD23-205ENST00000428163 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
BUD23-205ENST00000428163 ABCC8Q09428 1581 aa25■■□□□ 1.59
BUD23-205ENST00000428163 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
BUD23-205ENST00000428163 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
BUD23-205ENST00000428163 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
BUD23-205ENST00000428163 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
BUD23-205ENST00000428163 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
BUD23-205ENST00000428163 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
BUD23-205ENST00000428163 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
BUD23-205ENST00000428163 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
BUD23-205ENST00000428163 CUX1P39880 1505 aa24.73■■□□□ 1.55
BUD23-205ENST00000428163 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.552e-7■■■■■ 31.1
BUD23-205ENST00000428163 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
BUD23-205ENST00000428163 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
BUD23-205ENST00000428163 SOGA1O94964 1423 aa24.67■■□□□ 1.54
BUD23-205ENST00000428163 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
BUD23-205ENST00000428163 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.53
BUD23-205ENST00000428163 CHD1O14646 1710 aa24.55■■□□□ 1.52
BUD23-205ENST00000428163 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
BUD23-205ENST00000428163 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
BUD23-205ENST00000428163 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
BUD23-205ENST00000428163 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
BUD23-205ENST00000428163 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
BUD23-205ENST00000428163 ARHGEF11O15085 1522 aa24.45■■□□□ 1.51
BUD23-205ENST00000428163 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.51
BUD23-205ENST00000428163 GRIN2BQ13224 1484 aa24.45■■□□□ 1.5
BUD23-205ENST00000428163 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
BUD23-205ENST00000428163 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
BUD23-205ENST00000428163 TOP2BQ02880 1626 aa24.41■■□□□ 1.5
BUD23-205ENST00000428163 ABCA5Q8WWZ7 1642 aa24.4■■□□□ 1.5
BUD23-205ENST00000428163 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
BUD23-205ENST00000428163 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
BUD23-205ENST00000428163 FBLN2P98095 1184 aa24.38■■□□□ 1.49
BUD23-205ENST00000428163 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
BUD23-205ENST00000428163 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
BUD23-205ENST00000428163 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
BUD23-205ENST00000428163 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
BUD23-205ENST00000428163 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
BUD23-205ENST00000428163 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
BUD23-205ENST00000428163 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
BUD23-205ENST00000428163 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
BUD23-205ENST00000428163 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
BUD23-205ENST00000428163 GRIN2AQ12879 1464 aa24.14■■□□□ 1.46
BUD23-205ENST00000428163 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
BUD23-205ENST00000428163 NUP160Q12769 1436 aa24.1■■□□□ 1.45
BUD23-205ENST00000428163 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
BUD23-205ENST00000428163 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
BUD23-205ENST00000428163 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
BUD23-205ENST00000428163 IGF1RP08069 1367 aa23.9■■□□□ 1.42
BUD23-205ENST00000428163 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
BUD23-205ENST00000428163 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
BUD23-205ENST00000428163 CUL7Q14999 1698 aa23.82■■□□□ 1.4
BUD23-205ENST00000428163 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms