RNA–Protein interactions for RNA: ENST00000427955.1

AC011890.1-201, humanhuman

BASIC

Gene AC011890.1, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011890.1-201ENST00000427955 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
AC011890.1-201ENST00000427955 ABCC9O60706 1549 aa26.34■■□□□ 1.81
AC011890.1-201ENST00000427955 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
AC011890.1-201ENST00000427955 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
AC011890.1-201ENST00000427955 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
AC011890.1-201ENST00000427955 NACADO15069 1562 aa24.84■■□□□ 1.57
AC011890.1-201ENST00000427955 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
AC011890.1-201ENST00000427955 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
AC011890.1-201ENST00000427955 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
AC011890.1-201ENST00000427955 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
AC011890.1-201ENST00000427955 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
AC011890.1-201ENST00000427955 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
AC011890.1-201ENST00000427955 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
AC011890.1-201ENST00000427955 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
AC011890.1-201ENST00000427955 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
AC011890.1-201ENST00000427955 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
AC011890.1-201ENST00000427955 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
AC011890.1-201ENST00000427955 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
AC011890.1-201ENST00000427955 DNAJC5Q9H3Z4 198 aa22.94■■□□□ 1.26
AC011890.1-201ENST00000427955 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
AC011890.1-201ENST00000427955 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
AC011890.1-201ENST00000427955 CUX2O14529 1486 aa22.79■■□□□ 1.24
AC011890.1-201ENST00000427955 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
AC011890.1-201ENST00000427955 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
AC011890.1-201ENST00000427955 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
AC011890.1-201ENST00000427955 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
AC011890.1-201ENST00000427955 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
AC011890.1-201ENST00000427955 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
AC011890.1-201ENST00000427955 NESP48681 1621 aa22.59■■□□□ 1.21
AC011890.1-201ENST00000427955 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
AC011890.1-201ENST00000427955 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
AC011890.1-201ENST00000427955 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
AC011890.1-201ENST00000427955 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
AC011890.1-201ENST00000427955 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
AC011890.1-201ENST00000427955 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
AC011890.1-201ENST00000427955 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
AC011890.1-201ENST00000427955 WIZO95785 1651 aa22.19■■□□□ 1.14
AC011890.1-201ENST00000427955 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
AC011890.1-201ENST00000427955 WDR62O43379 1518 aa22.06■■□□□ 1.12
AC011890.1-201ENST00000427955 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
AC011890.1-201ENST00000427955 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
AC011890.1-201ENST00000427955 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
AC011890.1-201ENST00000427955 CFTRP13569 1480 aa21.93■■□□□ 1.1
AC011890.1-201ENST00000427955 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
AC011890.1-201ENST00000427955 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
AC011890.1-201ENST00000427955 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
AC011890.1-201ENST00000427955 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
AC011890.1-201ENST00000427955 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
AC011890.1-201ENST00000427955 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
AC011890.1-201ENST00000427955 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
AC011890.1-201ENST00000427955 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
AC011890.1-201ENST00000427955 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
AC011890.1-201ENST00000427955 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
AC011890.1-201ENST00000427955 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
AC011890.1-201ENST00000427955 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
AC011890.1-201ENST00000427955 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
AC011890.1-201ENST00000427955 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
AC011890.1-201ENST00000427955 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
AC011890.1-201ENST00000427955 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
AC011890.1-201ENST00000427955 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
AC011890.1-201ENST00000427955 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.01
AC011890.1-201ENST00000427955 CHD1O14646 1710 aa21.3■■□□□ 1
AC011890.1-201ENST00000427955 POLA1P09884 1462 aaPredicted RBP21.29■■□□□ 1
AC011890.1-201ENST00000427955 FBLN2P98095 1184 aa21.23■□□□□ 0.99
AC011890.1-201ENST00000427955 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
AC011890.1-201ENST00000427955 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
AC011890.1-201ENST00000427955 SOGA1O94964 1423 aa21.21■□□□□ 0.99
AC011890.1-201ENST00000427955 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
AC011890.1-201ENST00000427955 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
AC011890.1-201ENST00000427955 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
AC011890.1-201ENST00000427955 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
AC011890.1-201ENST00000427955 CUX1P39880 1505 aa21.1■□□□□ 0.97
AC011890.1-201ENST00000427955 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
AC011890.1-201ENST00000427955 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
AC011890.1-201ENST00000427955 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
AC011890.1-201ENST00000427955 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
AC011890.1-201ENST00000427955 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
AC011890.1-201ENST00000427955 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
AC011890.1-201ENST00000427955 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
AC011890.1-201ENST00000427955 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
AC011890.1-201ENST00000427955 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
AC011890.1-201ENST00000427955 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
AC011890.1-201ENST00000427955 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
AC011890.1-201ENST00000427955 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
AC011890.1-201ENST00000427955 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
AC011890.1-201ENST00000427955 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
AC011890.1-201ENST00000427955 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
AC011890.1-201ENST00000427955 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
AC011890.1-201ENST00000427955 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
AC011890.1-201ENST00000427955 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
AC011890.1-201ENST00000427955 NUP160Q12769 1436 aa20.7■□□□□ 0.9
AC011890.1-201ENST00000427955 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
AC011890.1-201ENST00000427955 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
AC011890.1-201ENST00000427955 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
AC011890.1-201ENST00000427955 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
AC011890.1-201ENST00000427955 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
AC011890.1-201ENST00000427955 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
AC011890.1-201ENST00000427955 PRG4Q92954 1404 aaPredicted RBP20.52■□□□□ 0.87
AC011890.1-201ENST00000427955 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
AC011890.1-201ENST00000427955 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms