RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 NISCHQ9Y2I1 1504 aa38.88■■■■□ 3.81
AFF3-208ENST00000427118 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
AFF3-208ENST00000427118 ABCC9O60706 1549 aa34.25■■■■□ 3.07
AFF3-208ENST00000427118 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
AFF3-208ENST00000427118 NACADO15069 1562 aa32.61■■■□□ 2.81
AFF3-208ENST00000427118 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
AFF3-208ENST00000427118 ZCCHC6Q5VYS8 1495 aaKnown RBP32.33■■■□□ 2.77
AFF3-208ENST00000427118 MYO15BQ96JP2 1530 aa32.28■■■□□ 2.76
AFF3-208ENST00000427118 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
AFF3-208ENST00000427118 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
AFF3-208ENST00000427118 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
AFF3-208ENST00000427118 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
AFF3-208ENST00000427118 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
AFF3-208ENST00000427118 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
AFF3-208ENST00000427118 SHROOM4Q9ULL8 1493 aa31.3■■■□□ 2.6
AFF3-208ENST00000427118 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
AFF3-208ENST00000427118 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.54
AFF3-208ENST00000427118 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
AFF3-208ENST00000427118 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
AFF3-208ENST00000427118 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
AFF3-208ENST00000427118 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
AFF3-208ENST00000427118 NCAPD3P42695 1498 aa30.1■■■□□ 2.41
AFF3-208ENST00000427118 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
AFF3-208ENST00000427118 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
AFF3-208ENST00000427118 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
AFF3-208ENST00000427118 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
AFF3-208ENST00000427118 BAZ1BQ9UIG0 1483 aaKnown RBP29.84■■■□□ 2.37
AFF3-208ENST00000427118 WIZO95785 1651 aa29.7■■■□□ 2.35
AFF3-208ENST00000427118 NESP48681 1621 aa29.59■■■□□ 2.33
AFF3-208ENST00000427118 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
AFF3-208ENST00000427118 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
AFF3-208ENST00000427118 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
AFF3-208ENST00000427118 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
AFF3-208ENST00000427118 KIF21AQ7Z4S6 1674 aa29.22■■■□□ 2.27
AFF3-208ENST00000427118 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
AFF3-208ENST00000427118 CUX2O14529 1486 aa29.21■■■□□ 2.27
AFF3-208ENST00000427118 THOC2Q8NI27 1593 aaKnown RBP29.16■■■□□ 2.26
AFF3-208ENST00000427118 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
AFF3-208ENST00000427118 CFTRP13569 1480 aa29■■■□□ 2.23
AFF3-208ENST00000427118 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
AFF3-208ENST00000427118 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
AFF3-208ENST00000427118 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
AFF3-208ENST00000427118 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
AFF3-208ENST00000427118 WDR62O43379 1518 aa28.83■■■□□ 2.21
AFF3-208ENST00000427118 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
AFF3-208ENST00000427118 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
AFF3-208ENST00000427118 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
AFF3-208ENST00000427118 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
AFF3-208ENST00000427118 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
AFF3-208ENST00000427118 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
AFF3-208ENST00000427118 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
AFF3-208ENST00000427118 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
AFF3-208ENST00000427118 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
AFF3-208ENST00000427118 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
AFF3-208ENST00000427118 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
AFF3-208ENST00000427118 CUX1P39880 1505 aa28.17■■■□□ 2.1
AFF3-208ENST00000427118 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
AFF3-208ENST00000427118 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
AFF3-208ENST00000427118 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
AFF3-208ENST00000427118 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.08
AFF3-208ENST00000427118 SOGA1O94964 1423 aa28.03■■■□□ 2.08
AFF3-208ENST00000427118 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
AFF3-208ENST00000427118 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
AFF3-208ENST00000427118 WDR97A6NE52 1622 aa27.89■■■□□ 2.06
AFF3-208ENST00000427118 CHD1O14646 1710 aa27.85■■■□□ 2.05
AFF3-208ENST00000427118 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
AFF3-208ENST00000427118 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
AFF3-208ENST00000427118 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
AFF3-208ENST00000427118 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
AFF3-208ENST00000427118 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
AFF3-208ENST00000427118 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
AFF3-208ENST00000427118 FBLN2P98095 1184 aa27.73■■■□□ 2.03
AFF3-208ENST00000427118 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
AFF3-208ENST00000427118 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
AFF3-208ENST00000427118 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
AFF3-208ENST00000427118 ABCA5Q8WWZ7 1642 aa27.71■■■□□ 2.03
AFF3-208ENST00000427118 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
AFF3-208ENST00000427118 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
AFF3-208ENST00000427118 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
AFF3-208ENST00000427118 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
AFF3-208ENST00000427118 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
AFF3-208ENST00000427118 SYNJ2O15056 1496 aa27.57■■■□□ 2
AFF3-208ENST00000427118 ARHGEF11O15085 1522 aa27.57■■■□□ 2
AFF3-208ENST00000427118 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
AFF3-208ENST00000427118 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
AFF3-208ENST00000427118 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
AFF3-208ENST00000427118 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
AFF3-208ENST00000427118 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
AFF3-208ENST00000427118 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
AFF3-208ENST00000427118 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
AFF3-208ENST00000427118 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
AFF3-208ENST00000427118 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
AFF3-208ENST00000427118 NUP160Q12769 1436 aa27.28■■□□□ 1.96
AFF3-208ENST00000427118 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
AFF3-208ENST00000427118 IGF1RP08069 1367 aa27.2■■□□□ 1.94
AFF3-208ENST00000427118 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
AFF3-208ENST00000427118 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
AFF3-208ENST00000427118 CUL7Q14999 1698 aa27.11■■□□□ 1.93
AFF3-208ENST00000427118 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
AFF3-208ENST00000427118 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms