RNA–Protein interactions for RNA: ENST00000425887.2

AC008268.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008268.1, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008268.1-201ENST00000425887 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
AC008268.1-201ENST00000425887 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
AC008268.1-201ENST00000425887 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
AC008268.1-201ENST00000425887 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
AC008268.1-201ENST00000425887 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
AC008268.1-201ENST00000425887 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
AC008268.1-201ENST00000425887 FOXD1Q16676 465 aa22.32■■□□□ 1.16
AC008268.1-201ENST00000425887 ABCC9O60706 1549 aa22.19■■□□□ 1.14
AC008268.1-201ENST00000425887 ZCCHC6Q5VYS8 1495 aaKnown RBP22.05■■□□□ 1.12
AC008268.1-201ENST00000425887 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
AC008268.1-201ENST00000425887 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
AC008268.1-201ENST00000425887 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
AC008268.1-201ENST00000425887 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
AC008268.1-201ENST00000425887 NACADO15069 1562 aa21.58■■□□□ 1.05
AC008268.1-201ENST00000425887 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
AC008268.1-201ENST00000425887 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
AC008268.1-201ENST00000425887 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
AC008268.1-201ENST00000425887 ADRA2BP18089 450 aa21.14■□□□□ 0.97
AC008268.1-201ENST00000425887 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
AC008268.1-201ENST00000425887 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
AC008268.1-201ENST00000425887 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
AC008268.1-201ENST00000425887 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
AC008268.1-201ENST00000425887 MSH5O43196 834 aa20.76■□□□□ 0.91
AC008268.1-201ENST00000425887 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
AC008268.1-201ENST00000425887 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
AC008268.1-201ENST00000425887 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
AC008268.1-201ENST00000425887 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
AC008268.1-201ENST00000425887 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
AC008268.1-201ENST00000425887 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
AC008268.1-201ENST00000425887 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
AC008268.1-201ENST00000425887 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
AC008268.1-201ENST00000425887 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
AC008268.1-201ENST00000425887 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
AC008268.1-201ENST00000425887 WIZO95785 1651 aa20.01■□□□□ 0.79
AC008268.1-201ENST00000425887 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
AC008268.1-201ENST00000425887 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
AC008268.1-201ENST00000425887 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
AC008268.1-201ENST00000425887 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
AC008268.1-201ENST00000425887 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
AC008268.1-201ENST00000425887 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
AC008268.1-201ENST00000425887 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
AC008268.1-201ENST00000425887 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
AC008268.1-201ENST00000425887 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
AC008268.1-201ENST00000425887 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
AC008268.1-201ENST00000425887 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
AC008268.1-201ENST00000425887 NESP48681 1621 aa19.33■□□□□ 0.69
AC008268.1-201ENST00000425887 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.69
AC008268.1-201ENST00000425887 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
AC008268.1-201ENST00000425887 CFTRP13569 1480 aa19.29■□□□□ 0.68
AC008268.1-201ENST00000425887 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
AC008268.1-201ENST00000425887 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
AC008268.1-201ENST00000425887 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
AC008268.1-201ENST00000425887 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
AC008268.1-201ENST00000425887 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
AC008268.1-201ENST00000425887 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
AC008268.1-201ENST00000425887 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
AC008268.1-201ENST00000425887 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
AC008268.1-201ENST00000425887 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
AC008268.1-201ENST00000425887 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
AC008268.1-201ENST00000425887 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
AC008268.1-201ENST00000425887 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
AC008268.1-201ENST00000425887 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
AC008268.1-201ENST00000425887 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
AC008268.1-201ENST00000425887 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
AC008268.1-201ENST00000425887 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
AC008268.1-201ENST00000425887 URB2Q14146 1524 aaKnown RBP18.92■□□□□ 0.62
AC008268.1-201ENST00000425887 EEA1Q15075 1411 aa18.91■□□□□ 0.62
AC008268.1-201ENST00000425887 WDR62O43379 1518 aa18.9■□□□□ 0.62
AC008268.1-201ENST00000425887 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
AC008268.1-201ENST00000425887 CUX1P39880 1505 aa18.9■□□□□ 0.62
AC008268.1-201ENST00000425887 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
AC008268.1-201ENST00000425887 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
AC008268.1-201ENST00000425887 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
AC008268.1-201ENST00000425887 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
AC008268.1-201ENST00000425887 CUX2O14529 1486 aa18.71■□□□□ 0.59
AC008268.1-201ENST00000425887 SOGA1O94964 1423 aa18.69■□□□□ 0.58
AC008268.1-201ENST00000425887 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
AC008268.1-201ENST00000425887 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
AC008268.1-201ENST00000425887 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
AC008268.1-201ENST00000425887 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
AC008268.1-201ENST00000425887 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
AC008268.1-201ENST00000425887 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
AC008268.1-201ENST00000425887 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
AC008268.1-201ENST00000425887 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
AC008268.1-201ENST00000425887 KIF21BO75037 1637 aa18.59■□□□□ 0.57
AC008268.1-201ENST00000425887 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
AC008268.1-201ENST00000425887 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
AC008268.1-201ENST00000425887 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
AC008268.1-201ENST00000425887 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
AC008268.1-201ENST00000425887 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
AC008268.1-201ENST00000425887 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
AC008268.1-201ENST00000425887 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
AC008268.1-201ENST00000425887 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
AC008268.1-201ENST00000425887 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
AC008268.1-201ENST00000425887 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
AC008268.1-201ENST00000425887 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
AC008268.1-201ENST00000425887 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
AC008268.1-201ENST00000425887 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
AC008268.1-201ENST00000425887 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
AC008268.1-201ENST00000425887 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms