RNA–Protein interactions for RNA: ENST00000425597.7

SCAMP5-202, Transcript of secretory carrier membrane protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP5, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-202ENST00000425597 NISCHQ9Y2I1 1504 aa29.29■■■□□ 2.28
SCAMP5-202ENST00000425597 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
SCAMP5-202ENST00000425597 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
SCAMP5-202ENST00000425597 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
SCAMP5-202ENST00000425597 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
SCAMP5-202ENST00000425597 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
SCAMP5-202ENST00000425597 ABCC9O60706 1549 aa24.11■■□□□ 1.45
SCAMP5-202ENST00000425597 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
SCAMP5-202ENST00000425597 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
SCAMP5-202ENST00000425597 SCRIBQ14160 1630 aa23.75■■□□□ 1.39
SCAMP5-202ENST00000425597 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
SCAMP5-202ENST00000425597 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
SCAMP5-202ENST00000425597 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
SCAMP5-202ENST00000425597 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
SCAMP5-202ENST00000425597 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
SCAMP5-202ENST00000425597 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.331e-6■■■■□ 24.5
SCAMP5-202ENST00000425597 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
SCAMP5-202ENST00000425597 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
SCAMP5-202ENST00000425597 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
SCAMP5-202ENST00000425597 NACADO15069 1562 aa23.01■■□□□ 1.27
SCAMP5-202ENST00000425597 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
SCAMP5-202ENST00000425597 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
SCAMP5-202ENST00000425597 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
SCAMP5-202ENST00000425597 HRCP23327 699 aa22.88■■□□□ 1.25
SCAMP5-202ENST00000425597 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
SCAMP5-202ENST00000425597 WIZO95785 1651 aa22.79■■□□□ 1.24
SCAMP5-202ENST00000425597 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
SCAMP5-202ENST00000425597 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
SCAMP5-202ENST00000425597 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
SCAMP5-202ENST00000425597 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
SCAMP5-202ENST00000425597 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
SCAMP5-202ENST00000425597 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
SCAMP5-202ENST00000425597 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
SCAMP5-202ENST00000425597 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
SCAMP5-202ENST00000425597 SOGA1O94964 1423 aa22.22■■□□□ 1.15
SCAMP5-202ENST00000425597 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.15
SCAMP5-202ENST00000425597 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
SCAMP5-202ENST00000425597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
SCAMP5-202ENST00000425597 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
SCAMP5-202ENST00000425597 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
SCAMP5-202ENST00000425597 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
SCAMP5-202ENST00000425597 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
SCAMP5-202ENST00000425597 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SCAMP5-202ENST00000425597 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
SCAMP5-202ENST00000425597 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
SCAMP5-202ENST00000425597 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
SCAMP5-202ENST00000425597 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
SCAMP5-202ENST00000425597 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
SCAMP5-202ENST00000425597 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
SCAMP5-202ENST00000425597 APLP2Q06481 763 aa21.78■■□□□ 1.08
SCAMP5-202ENST00000425597 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
SCAMP5-202ENST00000425597 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
SCAMP5-202ENST00000425597 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
SCAMP5-202ENST00000425597 ITGAEP38570 1179 aa21.6■■□□□ 1.05
SCAMP5-202ENST00000425597 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
SCAMP5-202ENST00000425597 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
SCAMP5-202ENST00000425597 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
SCAMP5-202ENST00000425597 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
SCAMP5-202ENST00000425597 CLIP1P30622 1438 aa21.57■■□□□ 1.04
SCAMP5-202ENST00000425597 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
SCAMP5-202ENST00000425597 EEA1Q15075 1411 aa21.51■■□□□ 1.03
SCAMP5-202ENST00000425597 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
SCAMP5-202ENST00000425597 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
SCAMP5-202ENST00000425597 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
SCAMP5-202ENST00000425597 KANK4Q5T7N3 995 aaPredicted RBP21.38■■□□□ 1.01
SCAMP5-202ENST00000425597 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
SCAMP5-202ENST00000425597 CUX1P39880 1505 aa21.32■■□□□ 1
SCAMP5-202ENST00000425597 CUX2O14529 1486 aa21.31■■□□□ 1
SCAMP5-202ENST00000425597 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
SCAMP5-202ENST00000425597 KIF27Q86VH2 1401 aa21.29■■□□□ 1
SCAMP5-202ENST00000425597 NESP48681 1621 aa21.29■■□□□ 1
SCAMP5-202ENST00000425597 CFTRP13569 1480 aa21.26■□□□□ 0.99
SCAMP5-202ENST00000425597 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
SCAMP5-202ENST00000425597 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
SCAMP5-202ENST00000425597 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
SCAMP5-202ENST00000425597 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
SCAMP5-202ENST00000425597 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
SCAMP5-202ENST00000425597 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
SCAMP5-202ENST00000425597 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
SCAMP5-202ENST00000425597 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
SCAMP5-202ENST00000425597 KIF21BO75037 1637 aa21.14■□□□□ 0.97
SCAMP5-202ENST00000425597 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
SCAMP5-202ENST00000425597 IGF1RP08069 1367 aa21.13■□□□□ 0.97
SCAMP5-202ENST00000425597 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
SCAMP5-202ENST00000425597 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
SCAMP5-202ENST00000425597 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
SCAMP5-202ENST00000425597 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
SCAMP5-202ENST00000425597 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
SCAMP5-202ENST00000425597 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
SCAMP5-202ENST00000425597 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.96
SCAMP5-202ENST00000425597 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
SCAMP5-202ENST00000425597 MIER1Q8N108 512 aa20.95■□□□□ 0.95
SCAMP5-202ENST00000425597 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
SCAMP5-202ENST00000425597 ARHGAP35Q9NRY4 1499 aa20.95■□□□□ 0.94
SCAMP5-202ENST00000425597 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
SCAMP5-202ENST00000425597 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
SCAMP5-202ENST00000425597 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
SCAMP5-202ENST00000425597 FBLN2P98095 1184 aa20.92■□□□□ 0.94
SCAMP5-202ENST00000425597 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
SCAMP5-202ENST00000425597 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms