RNA–Protein interactions for RNA: ENST00000425325.2

AC012354.1-201, humanhuman

TSL 3 BASIC

Gene AC012354.1, Length 2,685 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012354.1-201ENST00000425325 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
AC012354.1-201ENST00000425325 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
AC012354.1-201ENST00000425325 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
AC012354.1-201ENST00000425325 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
AC012354.1-201ENST00000425325 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
AC012354.1-201ENST00000425325 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
AC012354.1-201ENST00000425325 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
AC012354.1-201ENST00000425325 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
AC012354.1-201ENST00000425325 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
AC012354.1-201ENST00000425325 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
AC012354.1-201ENST00000425325 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
AC012354.1-201ENST00000425325 HRCP23327 699 aa15.84■□□□□ 0.13
AC012354.1-201ENST00000425325 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
AC012354.1-201ENST00000425325 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
AC012354.1-201ENST00000425325 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
AC012354.1-201ENST00000425325 ABCC9O60706 1549 aa15.4■□□□□ 0.06
AC012354.1-201ENST00000425325 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
AC012354.1-201ENST00000425325 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
AC012354.1-201ENST00000425325 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
AC012354.1-201ENST00000425325 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
AC012354.1-201ENST00000425325 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
AC012354.1-201ENST00000425325 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
AC012354.1-201ENST00000425325 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
AC012354.1-201ENST00000425325 TRIM41Q8WV44 630 aa15.08■□□□□ 0
AC012354.1-201ENST00000425325 KCNA4P22459 653 aa15.06■□□□□ 0
AC012354.1-201ENST00000425325 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ 0
AC012354.1-201ENST00000425325 SCRIBQ14160 1630 aa15.05■□□□□ -0
AC012354.1-201ENST00000425325 NACADO15069 1562 aa14.98□□□□□ -0.01
AC012354.1-201ENST00000425325 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
AC012354.1-201ENST00000425325 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
AC012354.1-201ENST00000425325 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
AC012354.1-201ENST00000425325 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
AC012354.1-201ENST00000425325 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
AC012354.1-201ENST00000425325 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
AC012354.1-201ENST00000425325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
AC012354.1-201ENST00000425325 MYT1Q01538 1121 aa14.68□□□□□ -0.06
AC012354.1-201ENST00000425325 NEUROD1Q13562 356 aa14.68□□□□□ -0.06
AC012354.1-201ENST00000425325 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
AC012354.1-201ENST00000425325 ADRA2BP18089 450 aa14.67□□□□□ -0.06
AC012354.1-201ENST00000425325 WIZO95785 1651 aa14.65□□□□□ -0.06
AC012354.1-201ENST00000425325 ACIN1Q9UKV3 1341 aaKnown RBP14.65□□□□□ -0.06
AC012354.1-201ENST00000425325 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
AC012354.1-201ENST00000425325 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
AC012354.1-201ENST00000425325 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
AC012354.1-201ENST00000425325 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.09
AC012354.1-201ENST00000425325 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
AC012354.1-201ENST00000425325 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
AC012354.1-201ENST00000425325 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.1
AC012354.1-201ENST00000425325 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.1
AC012354.1-201ENST00000425325 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
AC012354.1-201ENST00000425325 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 SOGA1O94964 1423 aa14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
AC012354.1-201ENST00000425325 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
AC012354.1-201ENST00000425325 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
AC012354.1-201ENST00000425325 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
AC012354.1-201ENST00000425325 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
AC012354.1-201ENST00000425325 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
AC012354.1-201ENST00000425325 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
AC012354.1-201ENST00000425325 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
AC012354.1-201ENST00000425325 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
AC012354.1-201ENST00000425325 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
AC012354.1-201ENST00000425325 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
AC012354.1-201ENST00000425325 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
AC012354.1-201ENST00000425325 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
AC012354.1-201ENST00000425325 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
AC012354.1-201ENST00000425325 EEA1Q15075 1411 aa14.13□□□□□ -0.15
AC012354.1-201ENST00000425325 MIER1Q8N108 512 aa14.12□□□□□ -0.15
AC012354.1-201ENST00000425325 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
AC012354.1-201ENST00000425325 CLIP1P30622 1438 aa14.06□□□□□ -0.16
AC012354.1-201ENST00000425325 ZBTB22O15209 634 aa14.05□□□□□ -0.16
AC012354.1-201ENST00000425325 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
AC012354.1-201ENST00000425325 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
AC012354.1-201ENST00000425325 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
AC012354.1-201ENST00000425325 APLP2Q06481 763 aa14.03□□□□□ -0.16
AC012354.1-201ENST00000425325 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
AC012354.1-201ENST00000425325 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
AC012354.1-201ENST00000425325 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
AC012354.1-201ENST00000425325 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
AC012354.1-201ENST00000425325 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 KIF21BO75037 1637 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
AC012354.1-201ENST00000425325 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.18
AC012354.1-201ENST00000425325 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
AC012354.1-201ENST00000425325 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
AC012354.1-201ENST00000425325 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
AC012354.1-201ENST00000425325 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
AC012354.1-201ENST00000425325 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
AC012354.1-201ENST00000425325 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
AC012354.1-201ENST00000425325 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
AC012354.1-201ENST00000425325 ITGAEP38570 1179 aa13.83□□□□□ -0.2
AC012354.1-201ENST00000425325 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
AC012354.1-201ENST00000425325 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
AC012354.1-201ENST00000425325 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
AC012354.1-201ENST00000425325 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
AC012354.1-201ENST00000425325 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
AC012354.1-201ENST00000425325 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
AC012354.1-201ENST00000425325 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms