RNA–Protein interactions for RNA: ENST00000424203.5

GART-206, Transcript of phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase, humanhuman

TSL 1 (best)

Gene GART, Length 3,571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GART-206ENST00000424203 TARDBPQ13148 414 aaKnown RBP eCLIP7.14□□□□□ -1.271e-17■■■■■ 52.1
GART-206ENST00000424203 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.76□□□□□ -1.172e-17■■■■■ 57.6
GART-206ENST00000424203 QKIQ96PU8 341 aaKnown RBP eCLIP7.89□□□□□ -1.151e-13■■■■■ 26.9
GART-206ENST00000424203 EFTUD2Q15029 972 aaKnown RBP eCLIP7.79□□□□□ -1.165e-13■□□□□ 9
GART-206ENST00000424203 U2AF2P26368 475 aaKnown RBP eCLIP8.76□□□□□ -1.013e-10■■■□□ 18.9
GART-206ENST00000424203 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.934e-10■■■□□ 14.7
GART-206ENST00000424203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.98□□□□□ -0.659e-10■□□□□ 9.3
GART-206ENST00000424203 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.011e-9■■□□□ 13.9
GART-206ENST00000424203 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.122e-9■□□□□ 10.5
GART-206ENST00000424203 DDX3XO00571 662 aaKnown RBP eCLIP8.21□□□□□ -1.18e-9■■■□□ 17.2
GART-206ENST00000424203 G3BP1Q13283 466 aaKnown RBP eCLIP9.5□□□□□ -0.894e-8■■■□□ 16.5
GART-206ENST00000424203 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.23□□□□□ -1.251e-7■■■□□ 14.8
GART-206ENST00000424203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■■□□□ 12.6
GART-206ENST00000424203 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.2□□□□□ -1.422e-7■■■■□ 25.4
GART-206ENST00000424203 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■■■ 28
GART-206ENST00000424203 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -12e-7■□□□□ 10.9
GART-206ENST00000424203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.633e-7■□□□□ 10.5
GART-206ENST00000424203 RPS3P23396 243 aaKnown RBP eCLIP7.57□□□□□ -1.23e-7■■■■■ 39.2
GART-206ENST00000424203 TIA1P31483 386 aaKnown RBP eCLIP7.37□□□□□ -1.233e-7■■■■■ 29.8
GART-206ENST00000424203 FXR1P51114 621 aaKnown RBP eCLIP8.37□□□□□ -1.073e-7■□□□□ 10
GART-206ENST00000424203 XRCC6P12956 609 aaKnown RBP eCLIP8.69□□□□□ -1.023e-7■□□□□ 8.4
GART-206ENST00000424203 SF3B1O75533 1304 aaKnown RBP eCLIP8.05□□□□□ -1.124e-7■■■■■ 80.1
GART-206ENST00000424203 HNRNPLP14866 589 aaKnown RBP eCLIP7.6□□□□□ -1.194e-7■■■□□ 17.7
GART-206ENST00000424203 RBM22Q9NW64 420 aaKnown RBP eCLIP7.88□□□□□ -1.154e-7■■■■■ 29.9
GART-206ENST00000424203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.68□□□□□ -0.865e-7■■■□□ 17.6
GART-206ENST00000424203 SF3B4Q15427 424 aaKnown RBP eCLIP6.8□□□□□ -1.325e-7■■■□□ 17.7
GART-206ENST00000424203 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.03□□□□□ -1.125e-7■■■■□ 22.9
GART-206ENST00000424203 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.146e-7■■□□□ 13
GART-206ENST00000424203 FMR1Q06787 632 aaKnown RBP eCLIP8.58□□□□□ -1.047e-7■■□□□ 14.5
GART-206ENST00000424203 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.131e-6■■□□□ 13.5
GART-206ENST00000424203 PABPC4Q13310 644 aaKnown RBP eCLIP8.64□□□□□ -1.031e-6■■■□□ 15.2
GART-206ENST00000424203 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.1□□□□□ -1.111e-6■■■□□ 19.1
GART-206ENST00000424203 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.06□□□□□ -1.282e-6■■■■■ 41.6
GART-206ENST00000424203 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■□□□□ 9
GART-206ENST00000424203 NIPBLQ6KC79 2804 aaeCLIP5.63□□□□□ -1.512e-6■■■■□ 19.3
GART-206ENST00000424203 FXR2P51116 673 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■□□□ 13.8
GART-206ENST00000424203 RBM15Q96T37 977 aaKnown RBP eCLIP7.92□□□□□ -1.142e-6■□□□□ 10.9
GART-206ENST00000424203 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.24□□□□□ -0.932e-6■■□□□ 12.8
GART-206ENST00000424203 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■■■■ 49.2
Retrieved 39 of 39 RNA–protein pairs in 7.7 ms