RNA–Protein interactions for RNA: ENST00000421773.1

AFF4-204, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-204ENST00000421773 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
AFF4-204ENST00000421773 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
AFF4-204ENST00000421773 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
AFF4-204ENST00000421773 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
AFF4-204ENST00000421773 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
AFF4-204ENST00000421773 FOXD1Q16676 465 aa16.99■□□□□ 0.31
AFF4-204ENST00000421773 ADRA2BP18089 450 aa16.36■□□□□ 0.21
AFF4-204ENST00000421773 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
AFF4-204ENST00000421773 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
AFF4-204ENST00000421773 MSH5O43196 834 aa15.68■□□□□ 0.1
AFF4-204ENST00000421773 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
AFF4-204ENST00000421773 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
AFF4-204ENST00000421773 KCNA4P22459 653 aa15.38■□□□□ 0.05
AFF4-204ENST00000421773 PPP4R3CPQ6ZMV5 832 aa15.09■□□□□ 0.01
AFF4-204ENST00000421773 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
AFF4-204ENST00000421773 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
AFF4-204ENST00000421773 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
AFF4-204ENST00000421773 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
AFF4-204ENST00000421773 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
AFF4-204ENST00000421773 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
AFF4-204ENST00000421773 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
AFF4-204ENST00000421773 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
AFF4-204ENST00000421773 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
AFF4-204ENST00000421773 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
AFF4-204ENST00000421773 POTEDQ86YR6 584 aa14.27□□□□□ -0.13
AFF4-204ENST00000421773 ZBTB22O15209 634 aa14.13□□□□□ -0.15
AFF4-204ENST00000421773 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
AFF4-204ENST00000421773 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
AFF4-204ENST00000421773 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
AFF4-204ENST00000421773 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
AFF4-204ENST00000421773 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
AFF4-204ENST00000421773 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
AFF4-204ENST00000421773 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.21
AFF4-204ENST00000421773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■□□□□ 9.7
AFF4-204ENST00000421773 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
AFF4-204ENST00000421773 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
AFF4-204ENST00000421773 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
AFF4-204ENST00000421773 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
AFF4-204ENST00000421773 FKBP8Q14318 412 aa13.38□□□□□ -0.27
AFF4-204ENST00000421773 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
AFF4-204ENST00000421773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
AFF4-204ENST00000421773 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
AFF4-204ENST00000421773 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
AFF4-204ENST00000421773 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
AFF4-204ENST00000421773 APLP2Q06481 763 aa13.15□□□□□ -0.3
AFF4-204ENST00000421773 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
AFF4-204ENST00000421773 ZCCHC6Q5VYS8 1495 aaKnown RBP13.08□□□□□ -0.32
AFF4-204ENST00000421773 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
AFF4-204ENST00000421773 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
AFF4-204ENST00000421773 CAPN15O75808 1086 aa13.05□□□□□ -0.32
AFF4-204ENST00000421773 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
AFF4-204ENST00000421773 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
AFF4-204ENST00000421773 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
AFF4-204ENST00000421773 ABCC9O60706 1549 aa12.93□□□□□ -0.34
AFF4-204ENST00000421773 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
AFF4-204ENST00000421773 ABCB7O75027 752 aa12.79□□□□□ -0.36
AFF4-204ENST00000421773 DSG3P32926 999 aa12.78□□□□□ -0.36
AFF4-204ENST00000421773 NACADO15069 1562 aa12.77□□□□□ -0.37
AFF4-204ENST00000421773 POLA2Q14181 598 aa12.76□□□□□ -0.37
AFF4-204ENST00000421773 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
AFF4-204ENST00000421773 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
AFF4-204ENST00000421773 RB1CC1Q8TDY2 1594 aa12.67□□□□□ -0.38
AFF4-204ENST00000421773 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
AFF4-204ENST00000421773 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
AFF4-204ENST00000421773 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
AFF4-204ENST00000421773 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
AFF4-204ENST00000421773 FBLN2P98095 1184 aa12.51□□□□□ -0.41
AFF4-204ENST00000421773 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
AFF4-204ENST00000421773 BCANQ96GW7 911 aa12.49□□□□□ -0.41
AFF4-204ENST00000421773 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
AFF4-204ENST00000421773 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
AFF4-204ENST00000421773 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
AFF4-204ENST00000421773 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
AFF4-204ENST00000421773 PROM2Q8N271 834 aa12.39□□□□□ -0.43
AFF4-204ENST00000421773 SHROOM4Q9ULL8 1493 aa12.36□□□□□ -0.43
AFF4-204ENST00000421773 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
AFF4-204ENST00000421773 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
AFF4-204ENST00000421773 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
AFF4-204ENST00000421773 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
AFF4-204ENST00000421773 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
AFF4-204ENST00000421773 PKD2Q13563 968 aa12.28□□□□□ -0.44
AFF4-204ENST00000421773 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
AFF4-204ENST00000421773 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
AFF4-204ENST00000421773 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
AFF4-204ENST00000421773 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
AFF4-204ENST00000421773 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
AFF4-204ENST00000421773 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
AFF4-204ENST00000421773 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
AFF4-204ENST00000421773 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
AFF4-204ENST00000421773 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
AFF4-204ENST00000421773 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
AFF4-204ENST00000421773 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
AFF4-204ENST00000421773 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
AFF4-204ENST00000421773 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
AFF4-204ENST00000421773 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
AFF4-204ENST00000421773 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
AFF4-204ENST00000421773 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
AFF4-204ENST00000421773 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
AFF4-204ENST00000421773 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
AFF4-204ENST00000421773 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms