RNA–Protein interactions for RNA: ENST00000421397.5

NELFA-206, Transcript of negative elongation factor complex member A, humanhuman

TSL 5

Gene NELFA, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-206ENST00000421397 NISCHQ9Y2I1 1504 aa36.66■■■■□ 3.46
NELFA-206ENST00000421397 ABCC9O60706 1549 aa33.03■■■□□ 2.88
NELFA-206ENST00000421397 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
NELFA-206ENST00000421397 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
NELFA-206ENST00000421397 NACADO15069 1562 aa31.13■■■□□ 2.57
NELFA-206ENST00000421397 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
NELFA-206ENST00000421397 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
NELFA-206ENST00000421397 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
NELFA-206ENST00000421397 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
NELFA-206ENST00000421397 UNC13AQ9UPW8 1703 aa30.58■■■□□ 2.49
NELFA-206ENST00000421397 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
NELFA-206ENST00000421397 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
NELFA-206ENST00000421397 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
NELFA-206ENST00000421397 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
NELFA-206ENST00000421397 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
NELFA-206ENST00000421397 CC2D2AQ9P2K1 1620 aa29.8■■■□□ 2.36
NELFA-206ENST00000421397 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
NELFA-206ENST00000421397 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
NELFA-206ENST00000421397 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
NELFA-206ENST00000421397 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
NELFA-206ENST00000421397 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
NELFA-206ENST00000421397 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
NELFA-206ENST00000421397 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
NELFA-206ENST00000421397 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
NELFA-206ENST00000421397 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
NELFA-206ENST00000421397 CUX2O14529 1486 aa28.5■■■□□ 2.15
NELFA-206ENST00000421397 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
NELFA-206ENST00000421397 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
NELFA-206ENST00000421397 NESP48681 1621 aa28.35■■■□□ 2.13
NELFA-206ENST00000421397 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
NELFA-206ENST00000421397 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
NELFA-206ENST00000421397 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
NELFA-206ENST00000421397 THOC2Q8NI27 1593 aaKnown RBP28.04■■■□□ 2.08
NELFA-206ENST00000421397 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
NELFA-206ENST00000421397 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
NELFA-206ENST00000421397 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
NELFA-206ENST00000421397 WIZO95785 1651 aa27.87■■■□□ 2.05
NELFA-206ENST00000421397 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
NELFA-206ENST00000421397 WDR62O43379 1518 aa27.67■■■□□ 2.02
NELFA-206ENST00000421397 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
NELFA-206ENST00000421397 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
NELFA-206ENST00000421397 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
NELFA-206ENST00000421397 CFTRP13569 1480 aa27.57■■■□□ 2
NELFA-206ENST00000421397 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
NELFA-206ENST00000421397 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
NELFA-206ENST00000421397 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
NELFA-206ENST00000421397 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
NELFA-206ENST00000421397 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
NELFA-206ENST00000421397 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
NELFA-206ENST00000421397 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
NELFA-206ENST00000421397 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
NELFA-206ENST00000421397 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
NELFA-206ENST00000421397 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
NELFA-206ENST00000421397 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
NELFA-206ENST00000421397 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
NELFA-206ENST00000421397 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
NELFA-206ENST00000421397 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
NELFA-206ENST00000421397 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
NELFA-206ENST00000421397 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.883e-7■■■□□ 17.6
NELFA-206ENST00000421397 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
NELFA-206ENST00000421397 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
NELFA-206ENST00000421397 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
NELFA-206ENST00000421397 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
NELFA-206ENST00000421397 SOGA1O94964 1423 aa26.65■■□□□ 1.86
NELFA-206ENST00000421397 FBLN2P98095 1184 aa26.65■■□□□ 1.86
NELFA-206ENST00000421397 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
NELFA-206ENST00000421397 CHD1O14646 1710 aa26.62■■□□□ 1.85
NELFA-206ENST00000421397 CYB5RLQ6IPT4 315 aa26.59■■□□□ 1.85
NELFA-206ENST00000421397 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
NELFA-206ENST00000421397 CUX1P39880 1505 aa26.55■■□□□ 1.84
NELFA-206ENST00000421397 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
NELFA-206ENST00000421397 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
NELFA-206ENST00000421397 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
NELFA-206ENST00000421397 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
NELFA-206ENST00000421397 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
NELFA-206ENST00000421397 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
NELFA-206ENST00000421397 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
NELFA-206ENST00000421397 CLASP1Q7Z460 1538 aa26.38■■□□□ 1.81
NELFA-206ENST00000421397 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
NELFA-206ENST00000421397 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
NELFA-206ENST00000421397 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
NELFA-206ENST00000421397 TRHP20396 242 aaPredicted RBP26.32■■□□□ 1.8
NELFA-206ENST00000421397 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
NELFA-206ENST00000421397 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
NELFA-206ENST00000421397 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
NELFA-206ENST00000421397 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
NELFA-206ENST00000421397 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
NELFA-206ENST00000421397 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
NELFA-206ENST00000421397 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
NELFA-206ENST00000421397 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
NELFA-206ENST00000421397 NUP160Q12769 1436 aa26.01■■□□□ 1.75
NELFA-206ENST00000421397 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
NELFA-206ENST00000421397 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
NELFA-206ENST00000421397 ERCC6L2Q5T890 1561 aa25.97■■□□□ 1.75
NELFA-206ENST00000421397 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
NELFA-206ENST00000421397 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
NELFA-206ENST00000421397 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
NELFA-206ENST00000421397 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
NELFA-206ENST00000421397 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
NELFA-206ENST00000421397 IGF1RP08069 1367 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms