RNA–Protein interactions for RNA: ENST00000420417.3

AC016877.1-201, humanhuman

TSL 3 BASIC

Gene AC016877.1, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016877.1-201ENST00000420417 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
AC016877.1-201ENST00000420417 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
AC016877.1-201ENST00000420417 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
AC016877.1-201ENST00000420417 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
AC016877.1-201ENST00000420417 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
AC016877.1-201ENST00000420417 FOXD1Q16676 465 aa19.68■□□□□ 0.74
AC016877.1-201ENST00000420417 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
AC016877.1-201ENST00000420417 ADRA2BP18089 450 aa19.01■□□□□ 0.63
AC016877.1-201ENST00000420417 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
AC016877.1-201ENST00000420417 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
AC016877.1-201ENST00000420417 MSH5O43196 834 aa18.15■□□□□ 0.5
AC016877.1-201ENST00000420417 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
AC016877.1-201ENST00000420417 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
AC016877.1-201ENST00000420417 KCNA4P22459 653 aa17.34■□□□□ 0.37
AC016877.1-201ENST00000420417 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
AC016877.1-201ENST00000420417 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
AC016877.1-201ENST00000420417 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
AC016877.1-201ENST00000420417 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
AC016877.1-201ENST00000420417 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
AC016877.1-201ENST00000420417 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
AC016877.1-201ENST00000420417 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
AC016877.1-201ENST00000420417 ABCC9O60706 1549 aa16.67■□□□□ 0.26
AC016877.1-201ENST00000420417 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
AC016877.1-201ENST00000420417 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
AC016877.1-201ENST00000420417 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
AC016877.1-201ENST00000420417 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
AC016877.1-201ENST00000420417 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
AC016877.1-201ENST00000420417 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
AC016877.1-201ENST00000420417 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
AC016877.1-201ENST00000420417 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
AC016877.1-201ENST00000420417 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
AC016877.1-201ENST00000420417 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
AC016877.1-201ENST00000420417 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
AC016877.1-201ENST00000420417 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
AC016877.1-201ENST00000420417 ZBTB22O15209 634 aa15.92■□□□□ 0.14
AC016877.1-201ENST00000420417 NACADO15069 1562 aa15.92■□□□□ 0.14
AC016877.1-201ENST00000420417 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
AC016877.1-201ENST00000420417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
AC016877.1-201ENST00000420417 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
AC016877.1-201ENST00000420417 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
AC016877.1-201ENST00000420417 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
AC016877.1-201ENST00000420417 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
AC016877.1-201ENST00000420417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
AC016877.1-201ENST00000420417 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
AC016877.1-201ENST00000420417 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
AC016877.1-201ENST00000420417 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
AC016877.1-201ENST00000420417 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
AC016877.1-201ENST00000420417 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
AC016877.1-201ENST00000420417 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
AC016877.1-201ENST00000420417 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
AC016877.1-201ENST00000420417 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
AC016877.1-201ENST00000420417 APLP2Q06481 763 aa15.36■□□□□ 0.05
AC016877.1-201ENST00000420417 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
AC016877.1-201ENST00000420417 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
AC016877.1-201ENST00000420417 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
AC016877.1-201ENST00000420417 CAPN15O75808 1086 aa15.1■□□□□ 0.01
AC016877.1-201ENST00000420417 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
AC016877.1-201ENST00000420417 CC2D2AQ9P2K1 1620 aa15.09■□□□□ 0.01
AC016877.1-201ENST00000420417 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
AC016877.1-201ENST00000420417 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
AC016877.1-201ENST00000420417 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
AC016877.1-201ENST00000420417 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
AC016877.1-201ENST00000420417 POLA2Q14181 598 aa14.85□□□□□ -0.03
AC016877.1-201ENST00000420417 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
AC016877.1-201ENST00000420417 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
AC016877.1-201ENST00000420417 DSG3P32926 999 aa14.82□□□□□ -0.04
AC016877.1-201ENST00000420417 ABCB7O75027 752 aa14.79□□□□□ -0.04
AC016877.1-201ENST00000420417 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
AC016877.1-201ENST00000420417 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
AC016877.1-201ENST00000420417 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
AC016877.1-201ENST00000420417 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
AC016877.1-201ENST00000420417 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
AC016877.1-201ENST00000420417 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
AC016877.1-201ENST00000420417 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
AC016877.1-201ENST00000420417 FBLN2P98095 1184 aa14.64□□□□□ -0.07
AC016877.1-201ENST00000420417 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
AC016877.1-201ENST00000420417 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
AC016877.1-201ENST00000420417 WIZO95785 1651 aa14.55□□□□□ -0.08
AC016877.1-201ENST00000420417 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
AC016877.1-201ENST00000420417 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
AC016877.1-201ENST00000420417 FKBP8Q14318 412 aa14.43□□□□□ -0.1
AC016877.1-201ENST00000420417 NESP48681 1621 aa14.37□□□□□ -0.11
AC016877.1-201ENST00000420417 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
AC016877.1-201ENST00000420417 CUX2O14529 1486 aa14.33□□□□□ -0.12
AC016877.1-201ENST00000420417 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
AC016877.1-201ENST00000420417 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
AC016877.1-201ENST00000420417 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
AC016877.1-201ENST00000420417 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
AC016877.1-201ENST00000420417 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
AC016877.1-201ENST00000420417 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
AC016877.1-201ENST00000420417 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
AC016877.1-201ENST00000420417 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
AC016877.1-201ENST00000420417 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
AC016877.1-201ENST00000420417 DNAJC5Q9H3Z4 198 aa14.22□□□□□ -0.13
AC016877.1-201ENST00000420417 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
AC016877.1-201ENST00000420417 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
AC016877.1-201ENST00000420417 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
AC016877.1-201ENST00000420417 CFTRP13569 1480 aa14.19□□□□□ -0.14
AC016877.1-201ENST00000420417 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
AC016877.1-201ENST00000420417 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms