RNA–Protein interactions for RNA: ENST00000419664.1

AF064858.3-201, humanhuman

TSL 5 BASIC

Gene AF064858.3, Length 509 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF064858.3-201ENST00000419664 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
AF064858.3-201ENST00000419664 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
AF064858.3-201ENST00000419664 ABCC9O60706 1549 aa13.02□□□□□ -0.33
AF064858.3-201ENST00000419664 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
AF064858.3-201ENST00000419664 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
AF064858.3-201ENST00000419664 NACADO15069 1562 aa12.55□□□□□ -0.4
AF064858.3-201ENST00000419664 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
AF064858.3-201ENST00000419664 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
AF064858.3-201ENST00000419664 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
AF064858.3-201ENST00000419664 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
AF064858.3-201ENST00000419664 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
AF064858.3-201ENST00000419664 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
AF064858.3-201ENST00000419664 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
AF064858.3-201ENST00000419664 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
AF064858.3-201ENST00000419664 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
AF064858.3-201ENST00000419664 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
AF064858.3-201ENST00000419664 DNAJC5BQ9UF47 199 aa11.82□□□□□ -0.52
AF064858.3-201ENST00000419664 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
AF064858.3-201ENST00000419664 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
AF064858.3-201ENST00000419664 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
AF064858.3-201ENST00000419664 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
AF064858.3-201ENST00000419664 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
AF064858.3-201ENST00000419664 SMARCA2P51531 1590 aa11.58□□□□□ -0.55
AF064858.3-201ENST00000419664 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
AF064858.3-201ENST00000419664 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
AF064858.3-201ENST00000419664 WIZO95785 1651 aa11.54□□□□□ -0.56
AF064858.3-201ENST00000419664 NCAPD3P42695 1498 aa11.52□□□□□ -0.56
AF064858.3-201ENST00000419664 BAZ1BQ9UIG0 1483 aaKnown RBP11.49□□□□□ -0.57
AF064858.3-201ENST00000419664 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
AF064858.3-201ENST00000419664 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
AF064858.3-201ENST00000419664 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
AF064858.3-201ENST00000419664 NESP48681 1621 aa11.3□□□□□ -0.6
AF064858.3-201ENST00000419664 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
AF064858.3-201ENST00000419664 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
AF064858.3-201ENST00000419664 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
AF064858.3-201ENST00000419664 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
AF064858.3-201ENST00000419664 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
AF064858.3-201ENST00000419664 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
AF064858.3-201ENST00000419664 CFTRP13569 1480 aa11.15□□□□□ -0.62
AF064858.3-201ENST00000419664 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
AF064858.3-201ENST00000419664 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
AF064858.3-201ENST00000419664 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
AF064858.3-201ENST00000419664 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
AF064858.3-201ENST00000419664 CUX2O14529 1486 aa11.08□□□□□ -0.64
AF064858.3-201ENST00000419664 WDR62O43379 1518 aa11.08□□□□□ -0.64
AF064858.3-201ENST00000419664 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
AF064858.3-201ENST00000419664 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
AF064858.3-201ENST00000419664 DNMBPQ6XZF7 1577 aa10.97□□□□□ -0.65
AF064858.3-201ENST00000419664 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
AF064858.3-201ENST00000419664 CUX1P39880 1505 aa10.89□□□□□ -0.67
AF064858.3-201ENST00000419664 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
AF064858.3-201ENST00000419664 WDR97A6NE52 1622 aa10.88□□□□□ -0.67
AF064858.3-201ENST00000419664 BIVM-ERCC5R4GMW8 1640 aa10.88□□□□□ -0.67
AF064858.3-201ENST00000419664 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
AF064858.3-201ENST00000419664 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
AF064858.3-201ENST00000419664 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
AF064858.3-201ENST00000419664 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
AF064858.3-201ENST00000419664 FGD5Q6ZNL6 1462 aa10.84□□□□□ -0.67
AF064858.3-201ENST00000419664 IFT140Q96RY7 1462 aa10.84□□□□□ -0.67
AF064858.3-201ENST00000419664 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
AF064858.3-201ENST00000419664 ZNF608Q9ULD9 1512 aaPredicted RBP10.81□□□□□ -0.68
AF064858.3-201ENST00000419664 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
AF064858.3-201ENST00000419664 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
AF064858.3-201ENST00000419664 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
AF064858.3-201ENST00000419664 CHD1O14646 1710 aa10.77□□□□□ -0.69
AF064858.3-201ENST00000419664 ABCA5Q8WWZ7 1642 aa10.76□□□□□ -0.69
AF064858.3-201ENST00000419664 SOGA1O94964 1423 aa10.73□□□□□ -0.69
AF064858.3-201ENST00000419664 ABCA10Q8WWZ4 1543 aa10.73□□□□□ -0.69
AF064858.3-201ENST00000419664 AQRO60306 1485 aaKnown RBP eCLIP10.71□□□□□ -0.69
AF064858.3-201ENST00000419664 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
AF064858.3-201ENST00000419664 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
AF064858.3-201ENST00000419664 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
AF064858.3-201ENST00000419664 GRIN2BQ13224 1484 aa10.65□□□□□ -0.7
AF064858.3-201ENST00000419664 GAPVD1Q14C86 1478 aa10.65□□□□□ -0.7
AF064858.3-201ENST00000419664 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
AF064858.3-201ENST00000419664 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
AF064858.3-201ENST00000419664 CUL7Q14999 1698 aa10.59□□□□□ -0.71
AF064858.3-201ENST00000419664 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
AF064858.3-201ENST00000419664 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
AF064858.3-201ENST00000419664 CLASP1Q7Z460 1538 aa10.57□□□□□ -0.72
AF064858.3-201ENST00000419664 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
AF064858.3-201ENST00000419664 GRIN2AQ12879 1464 aa10.54□□□□□ -0.72
AF064858.3-201ENST00000419664 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
AF064858.3-201ENST00000419664 RIMBP3CA6NJZ7 1639 aa10.53□□□□□ -0.72
AF064858.3-201ENST00000419664 RIMBP3BA6NNM3 1639 aa10.53□□□□□ -0.72
AF064858.3-201ENST00000419664 RIMBP3Q9UFD9 1639 aa10.53□□□□□ -0.72
AF064858.3-201ENST00000419664 FHAD1B1AJZ9 1412 aa10.52□□□□□ -0.73
AF064858.3-201ENST00000419664 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
AF064858.3-201ENST00000419664 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
AF064858.3-201ENST00000419664 FBLN2P98095 1184 aa10.49□□□□□ -0.73
AF064858.3-201ENST00000419664 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
AF064858.3-201ENST00000419664 SHROOM2Q13796 1616 aa10.48□□□□□ -0.73
AF064858.3-201ENST00000419664 NUP160Q12769 1436 aa10.48□□□□□ -0.73
AF064858.3-201ENST00000419664 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
AF064858.3-201ENST00000419664 CTTNBP2Q8WZ74 1663 aa10.47□□□□□ -0.73
AF064858.3-201ENST00000419664 IGF1RP08069 1367 aa10.45□□□□□ -0.74
AF064858.3-201ENST00000419664 TRIM41Q8WV44 630 aa10.45□□□□□ -0.74
AF064858.3-201ENST00000419664 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
AF064858.3-201ENST00000419664 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
AF064858.3-201ENST00000419664 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms