RNA–Protein interactions for RNA: ENST00000419372.5

SFXN4-203, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-203ENST00000419372 NISCHQ9Y2I1 1504 aa59.04■■■■■ 7.04
SFXN4-203ENST00000419372 CCDC180Q9P1Z9 1646 aa52.7■■■■■ 6.03
SFXN4-203ENST00000419372 ABCC9O60706 1549 aa51.97■■■■■ 5.91
SFXN4-203ENST00000419372 RB1CC1Q8TDY2 1594 aa49.82■■■■■ 5.57
SFXN4-203ENST00000419372 NACADO15069 1562 aa49.66■■■■■ 5.54
SFXN4-203ENST00000419372 DCAF8L2P0C7V8 631 aa49.51■■■■■ 5.52
SFXN4-203ENST00000419372 MYO15BQ96JP2 1530 aa49.22■■■■■ 5.47
SFXN4-203ENST00000419372 ZCCHC6Q5VYS8 1495 aaKnown RBP49.1■■■■■ 5.45
SFXN4-203ENST00000419372 DCAF1Q9Y4B6 1507 aa48.84■■■■■ 5.41
SFXN4-203ENST00000419372 UNC13AQ9UPW8 1703 aa48.63■■■■■ 5.38
SFXN4-203ENST00000419372 PABPN1Q86U42 306 aaKnown RBP eCLIP48.48■■■■■ 5.35
SFXN4-203ENST00000419372 BICRAQ9NZM4 1560 aa48.3■■■■■ 5.32
SFXN4-203ENST00000419372 DNAJC5BQ9UF47 199 aa48.06■■■■■ 5.28
SFXN4-203ENST00000419372 SCRIBQ14160 1630 aa48.04■■■■■ 5.28
SFXN4-203ENST00000419372 SHROOM4Q9ULL8 1493 aa47.81■■■■■ 5.24
SFXN4-203ENST00000419372 EIF4G1Q04637 1599 aaKnown RBP47.08■■■■■ 5.13
SFXN4-203ENST00000419372 CC2D2AQ9P2K1 1620 aa46.99■■■■■ 5.11
SFXN4-203ENST00000419372 CECR2Q9BXF3 1484 aa46.76■■■■■ 5.08
SFXN4-203ENST00000419372 SMARCA4P51532 1647 aa45.91■■■■■ 4.94
SFXN4-203ENST00000419372 NCAPD3P42695 1498 aa45.81■■■■■ 4.92
SFXN4-203ENST00000419372 BAZ1AQ9NRL2 1556 aaPredicted RBP45.81■■■■■ 4.92
SFXN4-203ENST00000419372 ATAD2BQ9ULI0 1458 aa45.77■■■■■ 4.92
SFXN4-203ENST00000419372 SMARCA2P51531 1590 aa45.71■■■■■ 4.91
SFXN4-203ENST00000419372 HMGXB3Q12766 1538 aa45.56■■■■■ 4.88
SFXN4-203ENST00000419372 MROH2BQ7Z745 1585 aa45.49■■■■■ 4.87
SFXN4-203ENST00000419372 PEG3Q9GZU2 1588 aa45.47■■■■■ 4.87
SFXN4-203ENST00000419372 BAZ1BQ9UIG0 1483 aaKnown RBP45.39■■■■■ 4.86
SFXN4-203ENST00000419372 WIZO95785 1651 aa44.96■■■■■ 4.79
SFXN4-203ENST00000419372 ERCC6Q03468 1493 aa44.86■■■■■ 4.77
SFXN4-203ENST00000419372 NESP48681 1621 aa44.83■■■■■ 4.77
SFXN4-203ENST00000419372 RSF1Q96T23 1441 aaPredicted RBP44.81■■■■■ 4.76
SFXN4-203ENST00000419372 LAMC3Q9Y6N6 1575 aa44.69■■■■■ 4.74
SFXN4-203ENST00000419372 CUX2O14529 1486 aa44.54■■■■■ 4.72
SFXN4-203ENST00000419372 TOP2AP11388 1531 aaKnown RBP44.5■■■■■ 4.71
SFXN4-203ENST00000419372 CADPSQ9ULU8 1353 aa44.46■■■■■ 4.71
SFXN4-203ENST00000419372 PDS5BQ9NTI5 1447 aa44.41■■■■■ 4.7
SFXN4-203ENST00000419372 KIF21AQ7Z4S6 1674 aa44.29■■■■■ 4.68
SFXN4-203ENST00000419372 THOC2Q8NI27 1593 aaKnown RBP44.26■■■■■ 4.68
SFXN4-203ENST00000419372 CFTRP13569 1480 aa44.1■■■■■ 4.65
SFXN4-203ENST00000419372 MRC2Q9UBG0 1479 aa43.98■■■■■ 4.63
SFXN4-203ENST00000419372 CCDC88BA6NC98 1476 aa43.96■■■■■ 4.63
SFXN4-203ENST00000419372 FANCD2Q9BXW9 1451 aa43.96■■■■■ 4.63
SFXN4-203ENST00000419372 CEP164Q9UPV0 1460 aa43.96■■■■■ 4.63
SFXN4-203ENST00000419372 WDR62O43379 1518 aa43.84■■■■■ 4.61
SFXN4-203ENST00000419372 PRDM2Q13029 1718 aa43.72■■■■■ 4.59
SFXN4-203ENST00000419372 DNAJC5Q9H3Z4 198 aa43.66■■■■■ 4.58
SFXN4-203ENST00000419372 URB2Q14146 1524 aaKnown RBP43.53■■■■■ 4.56
SFXN4-203ENST00000419372 SUPT5HO00267 1087 aaKnown RBP43.35■■■■■ 4.53
SFXN4-203ENST00000419372 TOPBP1Q92547 1522 aa43.2■■■■■ 4.51
SFXN4-203ENST00000419372 ABCC8Q09428 1581 aa43.19■■■■■ 4.5
SFXN4-203ENST00000419372 DNMBPQ6XZF7 1577 aa43.12■■■■■ 4.49
SFXN4-203ENST00000419372 IFT140Q96RY7 1462 aa43.06■■■■■ 4.48
SFXN4-203ENST00000419372 ZNF608Q9ULD9 1512 aaPredicted RBP42.87■■■■■ 4.45
SFXN4-203ENST00000419372 POLA1P09884 1462 aaPredicted RBP42.81■■■■■ 4.44
SFXN4-203ENST00000419372 TARBP1Q13395 1621 aaKnown RBP42.75■■■■■ 4.43
SFXN4-203ENST00000419372 CUX1P39880 1505 aa42.7■■■■■ 4.43
SFXN4-203ENST00000419372 EIF4G3O43432 1585 aaKnown RBP42.69■■■■■ 4.43
SFXN4-203ENST00000419372 FGD5Q6ZNL6 1462 aa42.64■■■■■ 4.42
SFXN4-203ENST00000419372 SOGA1O94964 1423 aa42.63■■■■■ 4.41
SFXN4-203ENST00000419372 OSCARQ8IYS5 282 aa42.61■■■■■ 4.41
SFXN4-203ENST00000419372 RAD54L2Q9Y4B4 1467 aa42.61■■■■■ 4.41
SFXN4-203ENST00000419372 AQRO60306 1485 aaKnown RBP eCLIP42.57■■■■■ 4.419e-7■■■□□ 17.8
SFXN4-203ENST00000419372 TDRD9Q8NDG6 1382 aaKnown RBP42.43■■■■■ 4.38
SFXN4-203ENST00000419372 WDR97A6NE52 1622 aa42.42■■■■■ 4.38
SFXN4-203ENST00000419372 WRNQ14191 1432 aaPredicted RBP eCLIP42.29■■■■■ 4.36
SFXN4-203ENST00000419372 TOP2BQ02880 1626 aa42.23■■■■■ 4.35
SFXN4-203ENST00000419372 BIVM-ERCC5R4GMW8 1640 aa42.22■■■■■ 4.35
SFXN4-203ENST00000419372 CHD1O14646 1710 aa42.22■■■■■ 4.35
SFXN4-203ENST00000419372 ABCA10Q8WWZ4 1543 aa42.2■■■■■ 4.35
SFXN4-203ENST00000419372 GRIN2BQ13224 1484 aa42.19■■■■■ 4.34
SFXN4-203ENST00000419372 SNAPC4Q5SXM2 1469 aa42.19■■■■■ 4.34
SFXN4-203ENST00000419372 SYNJ1O43426 1573 aa42.18■■■■■ 4.34
SFXN4-203ENST00000419372 FBLN2P98095 1184 aa42.17■■■■■ 4.34
SFXN4-203ENST00000419372 GAPVD1Q14C86 1478 aa42.13■■■■■ 4.34
SFXN4-203ENST00000419372 MAGI1Q96QZ7 1491 aaPredicted RBP42.13■■■■■ 4.34
SFXN4-203ENST00000419372 ABCA5Q8WWZ7 1642 aa42.07■■■■■ 4.33
SFXN4-203ENST00000419372 TRIM41Q8WV44 630 aa42.05■■■■■ 4.32
SFXN4-203ENST00000419372 PBRM1Q86U86 1689 aa42.05■■■■■ 4.32
SFXN4-203ENST00000419372 CHMP7Q8WUX9 453 aaPredicted RBP41.99■■■■■ 4.31
SFXN4-203ENST00000419372 SYNJ2O15056 1496 aa41.97■■■■■ 4.31
SFXN4-203ENST00000419372 RIMBP3CA6NJZ7 1639 aa41.95■■■■■ 4.31
SFXN4-203ENST00000419372 RIMBP3BA6NNM3 1639 aa41.95■■■■■ 4.31
SFXN4-203ENST00000419372 RIMBP3Q9UFD9 1639 aa41.95■■■■■ 4.31
SFXN4-203ENST00000419372 ARHGEF11O15085 1522 aa41.91■■■■■ 4.3
SFXN4-203ENST00000419372 CLASP1Q7Z460 1538 aa41.77■■■■■ 4.28
SFXN4-203ENST00000419372 ADAMTS12P58397 1594 aa41.71■■■■■ 4.27
SFXN4-203ENST00000419372 ERICH3Q5RHP9 1530 aa41.69■■■■■ 4.27
SFXN4-203ENST00000419372 GRIN2AQ12879 1464 aa41.64■■■■■ 4.26
SFXN4-203ENST00000419372 FHAD1B1AJZ9 1412 aa41.63■■■■■ 4.26
SFXN4-203ENST00000419372 CYB5RLQ6IPT4 315 aa41.55■■■■■ 4.24
SFXN4-203ENST00000419372 ARAP1Q96P48 1450 aa41.54■■■■■ 4.24
SFXN4-203ENST00000419372 NUP160Q12769 1436 aa41.47■■■■■ 4.23
SFXN4-203ENST00000419372 KIF27Q86VH2 1401 aa41.45■■■■■ 4.23
SFXN4-203ENST00000419372 CEP170Q5SW79 1584 aa41.44■■■■■ 4.22
SFXN4-203ENST00000419372 IGF1RP08069 1367 aa41.3■■■■■ 4.2
SFXN4-203ENST00000419372 CUL7Q14999 1698 aa41.24■■■■■ 4.19
SFXN4-203ENST00000419372 SHROOM2Q13796 1616 aa41.2■■■■■ 4.19
SFXN4-203ENST00000419372 ERCC6L2Q5T890 1561 aa41.14■■■■■ 4.18
SFXN4-203ENST00000419372 RUSC2Q8N2Y8 1516 aa41.11■■■■■ 4.17
SFXN4-203ENST00000419372 CARMIL1Q5VZK9 1371 aa41.06■■■■■ 4.16
Retrieved 100 of 20,778 RNA–protein pairs in 229.2 ms