RNA–Protein interactions for RNA: ENST00000418705.2

RANBP1-205, Transcript of RAN binding protein 1, humanhuman

TSL 3

Gene RANBP1, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-205ENST00000418705 DKC1O60832 514 aaKnown RBP eCLIP18.59■□□□□ 0.571e-323■■■■■ 29.5
RANBP1-205ENST00000418705 AATFQ9NY61 560 aaKnown RBP eCLIP20.25■□□□□ 0.831e-45■■■■■ 31.9
RANBP1-205ENST00000418705 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.326e-41■■■□□ 18.6
RANBP1-205ENST00000418705 YBX3P16989 372 aaKnown RBP eCLIP22.26■■□□□ 1.152e-33■□□□□ 9.3
RANBP1-205ENST00000418705 PABPC4Q13310 644 aaKnown RBP eCLIP20.11■□□□□ 0.811e-30■■□□□ 13.8
RANBP1-205ENST00000418705 EIF4G2P78344 907 aaKnown RBP eCLIP23.04■■□□□ 1.282e-20■■■■■ 114.8
RANBP1-205ENST00000418705 SF3B4Q15427 424 aaKnown RBP eCLIP15.13■□□□□ 0.019e-20■■■■■ 51.2
RANBP1-205ENST00000418705 RBM5P52756 815 aaKnown RBP eCLIP20.73■□□□□ 0.911e-19■■■■□ 25.8
RANBP1-205ENST00000418705 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.03■□□□□ 0.162e-17■□□□□ 8.1
RANBP1-205ENST00000418705 EWSR1Q01844 656 aaKnown RBP eCLIP12.19□□□□□ -0.463e-17■■■■■ 69.6
RANBP1-205ENST00000418705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.01■□□□□ 0.314e-17■□□□□ 11.1
RANBP1-205ENST00000418705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.1■□□□□ 0.494e-16■■■■■ 72.4
RANBP1-205ENST00000418705 SF3A3Q12874 501 aaKnown RBP eCLIP14.9□□□□□ -0.022e-14■■■■□ 20.5
RANBP1-205ENST00000418705 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.51■□□□□ 0.077e-12■■□□□ 12.7
RANBP1-205ENST00000418705 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.629e-12■■■■■ 44.9
RANBP1-205ENST00000418705 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.62■□□□□ 0.091e-11■■■■■ 105.5
RANBP1-205ENST00000418705 GTF2F1P35269 517 aaKnown RBP eCLIP18.53■□□□□ 0.564e-11■■■■■ 93.9
RANBP1-205ENST00000418705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.68■■□□□ 1.229e-11■□□□□ 10.7
RANBP1-205ENST00000418705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.06■■□□□ 1.921e-10■■■□□ 19
RANBP1-205ENST00000418705 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.14■□□□□ 0.171e-10■■■■■ 35.3
RANBP1-205ENST00000418705 XRCC6P12956 609 aaKnown RBP eCLIP18.43■□□□□ 0.541e-10■□□□□ 8.7
RANBP1-205ENST00000418705 PUM1Q14671 1186 aaKnown RBP eCLIP17.54■□□□□ 0.41e-10■□□□□ 10.7
RANBP1-205ENST00000418705 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.1■□□□□ 0.332e-10■■■■■ 75.6
RANBP1-205ENST00000418705 SMNDC1O75940 238 aaKnown RBP eCLIP14.91□□□□□ -0.022e-10■■■■□ 25
RANBP1-205ENST00000418705 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.673e-10■■■□□ 15.6
RANBP1-205ENST00000418705 EFTUD2Q15029 972 aaKnown RBP eCLIP15.84■□□□□ 0.131e-9■■■■■ 49.6
RANBP1-205ENST00000418705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.691e-9■■■■□ 20.6
RANBP1-205ENST00000418705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.61■■□□□ 1.693e-9■■■□□ 19.1
RANBP1-205ENST00000418705 RBM22Q9NW64 420 aaKnown RBP eCLIP16.6■□□□□ 0.253e-9■■■■■ 26.8
RANBP1-205ENST00000418705 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.355e-9■■■■□ 21.5
RANBP1-205ENST00000418705 SAFB2Q14151 953 aaKnown RBP eCLIP24.17■■□□□ 1.466e-9■■■■□ 19.7
RANBP1-205ENST00000418705 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.316e-9■□□□□ 11.2
RANBP1-205ENST00000418705 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.08■□□□□ 0.649e-9■■■■■ 29.2
RANBP1-205ENST00000418705 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.89■□□□□ 0.779e-9■■■■■ 32.4
RANBP1-205ENST00000418705 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.361e-8■■■■□ 26.1
RANBP1-205ENST00000418705 FTOQ9C0B1 505 aaKnown RBP eCLIP19.07■□□□□ 0.641e-8■■■■■ 28.7
RANBP1-205ENST00000418705 RPS3P23396 243 aaKnown RBP eCLIP16.04■□□□□ 0.161e-8■□□□□ 11.1
RANBP1-205ENST00000418705 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.26■□□□□ 0.032e-8■□□□□ 10
RANBP1-205ENST00000418705 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.89■□□□□ 0.612e-8■■■□□ 15.6
RANBP1-205ENST00000418705 NOLC1Q14978 699 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■□□□ 11.9
RANBP1-205ENST00000418705 AGGF1Q8N302 714 aaeCLIP16.13■□□□□ 0.172e-8■■□□□ 12.2
RANBP1-205ENST00000418705 TIA1P31483 386 aaKnown RBP eCLIP15.31■□□□□ 0.042e-8■■■■□ 19.8
RANBP1-205ENST00000418705 EIF3DO15371 548 aaKnown RBP eCLIP17.91■□□□□ 0.463e-8■■□□□ 11.8
RANBP1-205ENST00000418705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.154e-8■■■■□ 25.2
RANBP1-205ENST00000418705 KHSRPQ92945 711 aaKnown RBP eCLIP18.5■□□□□ 0.554e-8■■□□□ 14.2
RANBP1-205ENST00000418705 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.23■□□□□ 0.517e-8■■■□□ 19
RANBP1-205ENST00000418705 HNRNPUQ00839 825 aaKnown RBP eCLIP21.06■□□□□ 0.968e-8■□□□□ 8.1
RANBP1-205ENST00000418705 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.519e-8■■■■□ 23.7
RANBP1-205ENST00000418705 NONOQ15233 471 aaKnown RBP eCLIP18.7■□□□□ 0.581e-7■■■■□ 19.4
RANBP1-205ENST00000418705 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.21e-7■■■■■ 34.3
RANBP1-205ENST00000418705 RBM15Q96T37 977 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■□□□□ 8.3
RANBP1-205ENST00000418705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.61■□□□□ 0.091e-7■■■□□ 14.9
RANBP1-205ENST00000418705 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.722e-7■■■■□ 23.8
RANBP1-205ENST00000418705 TAF15Q92804 592 aaKnown RBP eCLIP13.66□□□□□ -0.222e-7■■■■□ 21.3
RANBP1-205ENST00000418705 CPSF6Q16630 551 aaKnown RBP eCLIP15.51■□□□□ 0.073e-7■□□□□ 11.2
RANBP1-205ENST00000418705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.85□□□□□ -0.193e-7■■■□□ 18
RANBP1-205ENST00000418705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.65■□□□□ 0.743e-7■■■□□ 16.5
RANBP1-205ENST00000418705 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.823e-7■■■□□ 14.9
RANBP1-205ENST00000418705 ZRANB2O95218 330 aaKnown RBP eCLIP16.6■□□□□ 0.254e-7■■■■□ 24
RANBP1-205ENST00000418705 PRPF4O43172 522 aaKnown RBP eCLIP15.77■□□□□ 0.124e-7■■■■■ 27.1
RANBP1-205ENST00000418705 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.36■□□□□ 0.374e-7■□□□□ 10.5
RANBP1-205ENST00000418705 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.475e-7■■■■□ 24.8
RANBP1-205ENST00000418705 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.46e-7■■■□□ 19.2
RANBP1-205ENST00000418705 PCBP2Q15366 365 aaKnown RBP eCLIP15.57■□□□□ 0.087e-7■■■■■ 36.9
RANBP1-205ENST00000418705 LSM11P83369 360 aaKnown RBP eCLIP14.48□□□□□ -0.098e-7■■■■□ 20
RANBP1-205ENST00000418705 DDX6P26196 483 aaKnown RBP eCLIP17.74■□□□□ 0.438e-7■■□□□ 13.3
RANBP1-205ENST00000418705 LARP4Q71RC2 724 aaKnown RBP eCLIP15.11■□□□□ 0.018e-7■□□□□ 9.9
RANBP1-205ENST00000418705 TARDBPQ13148 414 aaKnown RBP eCLIP16.75■□□□□ 0.278e-7■■■■■ 40
RANBP1-205ENST00000418705 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.359e-7■■□□□ 12
RANBP1-205ENST00000418705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.98■□□□□ 0.319e-7■□□□□ 9.7
RANBP1-205ENST00000418705 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.62■□□□□ 0.099e-7■■■■■ 61.4
RANBP1-205ENST00000418705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.15■□□□□ 0.341e-6■□□□□ 11.1
RANBP1-205ENST00000418705 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.281e-6■■■■□ 24.5
RANBP1-205ENST00000418705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■□□□□ 10.8
RANBP1-205ENST00000418705 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■□□□□ 10.7
RANBP1-205ENST00000418705 NCBP2P52298 156 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■□ 22.6
RANBP1-205ENST00000418705 AKAP1Q92667 903 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■■■ 27.8
RANBP1-205ENST00000418705 SF3B1O75533 1304 aaKnown RBP eCLIP18.21■□□□□ 0.512e-6■■■■■ 31
RANBP1-205ENST00000418705 CDC40O60508 579 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■■□ 23.1
RANBP1-205ENST00000418705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■■■■■ 61.2
RANBP1-205ENST00000418705 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■□□□ 11.9
RANBP1-205ENST00000418705 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■■□□□ 12
RANBP1-205ENST00000418705 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■■□□ 18.8
RANBP1-205ENST00000418705 ZC3H11AO75152 810 aaKnown RBP eCLIP18.43■□□□□ 0.543e-6■□□□□ 9.8
RANBP1-205ENST00000418705 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.053e-6■■■■■ 34.3
RANBP1-205ENST00000418705 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.08■■□□□ 1.613e-6■■□□□ 12
RANBP1-205ENST00000418705 GPKOWQ92917 476 aaPredicted RBP eCLIP19.07■□□□□ 0.644e-6■□□□□ 11
RANBP1-205ENST00000418705 G3BP1Q13283 466 aaKnown RBP eCLIP20.47■□□□□ 0.878e-6■■□□□ 11.5
Retrieved 88 of 88 RNA–protein pairs in 7.5 ms