RNA–Protein interactions for RNA: ENST00000417982.6

PCTP-203, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 2

Gene PCTP, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-203ENST00000417982 NISCHQ9Y2I1 1504 aa44.09■■■■■ 4.65
PCTP-203ENST00000417982 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
PCTP-203ENST00000417982 ZCCHC6Q5VYS8 1495 aaKnown RBP37.23■■■■□ 3.55
PCTP-203ENST00000417982 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.46
PCTP-203ENST00000417982 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
PCTP-203ENST00000417982 DCAF8L2P0C7V8 631 aa36.09■■■■□ 3.37
PCTP-203ENST00000417982 MYO15BQ96JP2 1530 aa35.64■■■■□ 3.3
PCTP-203ENST00000417982 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
PCTP-203ENST00000417982 ABCC9O60706 1549 aa35.23■■■■□ 3.23
PCTP-203ENST00000417982 NACADO15069 1562 aa35.17■■■■□ 3.22
PCTP-203ENST00000417982 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
PCTP-203ENST00000417982 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
PCTP-203ENST00000417982 CHIC1Q5VXU3 224 aa34.59■■■■□ 3.13
PCTP-203ENST00000417982 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
PCTP-203ENST00000417982 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.08
PCTP-203ENST00000417982 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
PCTP-203ENST00000417982 UNC13AQ9UPW8 1703 aa34.11■■■■□ 3.05
PCTP-203ENST00000417982 BAZ1AQ9NRL2 1556 aaPredicted RBP33.93■■■■□ 3.02
PCTP-203ENST00000417982 WIZO95785 1651 aa33.91■■■■□ 3.02
PCTP-203ENST00000417982 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
PCTP-203ENST00000417982 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
PCTP-203ENST00000417982 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
PCTP-203ENST00000417982 EIF4G1Q04637 1599 aaKnown RBP33.42■■■□□ 2.94
PCTP-203ENST00000417982 PABPN1Q86U42 306 aaKnown RBP eCLIP33.41■■■□□ 2.94
PCTP-203ENST00000417982 TRIM41Q8WV44 630 aa33.38■■■□□ 2.93
PCTP-203ENST00000417982 LOC105371045A0A1W2PR82 267 aa33.33■■■□□ 2.93
PCTP-203ENST00000417982 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
PCTP-203ENST00000417982 PEG3Q9GZU2 1588 aa33.27■■■□□ 2.92
PCTP-203ENST00000417982 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
PCTP-203ENST00000417982 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
PCTP-203ENST00000417982 FAM9AQ8IZU1 332 aaPredicted RBP32.85■■■□□ 2.85
PCTP-203ENST00000417982 ABCC8Q09428 1581 aa32.85■■■□□ 2.85
PCTP-203ENST00000417982 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
PCTP-203ENST00000417982 PCGF6Q9BYE7 350 aa32.67■■■□□ 2.82
PCTP-203ENST00000417982 HMGXB3Q12766 1538 aa32.52■■■□□ 2.8
PCTP-203ENST00000417982 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
PCTP-203ENST00000417982 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
PCTP-203ENST00000417982 HRCP23327 699 aa32.45■■■□□ 2.79
PCTP-203ENST00000417982 SOGA1O94964 1423 aa32.41■■■□□ 2.78
PCTP-203ENST00000417982 EEA1Q15075 1411 aa32.4■■■□□ 2.78
PCTP-203ENST00000417982 TRIM26Q12899 539 aaPredicted RBP32.4■■■□□ 2.78
PCTP-203ENST00000417982 EHMT2Q96KQ7 1210 aa32.39■■■□□ 2.78
PCTP-203ENST00000417982 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
PCTP-203ENST00000417982 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.76
PCTP-203ENST00000417982 CSRNP3Q8WYN3 585 aa32.18■■■□□ 2.74
PCTP-203ENST00000417982 TOP2BQ02880 1626 aa32.12■■■□□ 2.73
PCTP-203ENST00000417982 TNIKQ9UKE5 1360 aa32.12■■■□□ 2.73
PCTP-203ENST00000417982 BIVM-ERCC5R4GMW8 1640 aa32.07■■■□□ 2.72
PCTP-203ENST00000417982 CEP162Q5TB80 1403 aa32.04■■■□□ 2.72
PCTP-203ENST00000417982 GOLGA3Q08378 1498 aa32.04■■■□□ 2.72
PCTP-203ENST00000417982 CFTRP13569 1480 aa32.03■■■□□ 2.72
PCTP-203ENST00000417982 KIF21BO75037 1637 aa32■■■□□ 2.71
PCTP-203ENST00000417982 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
PCTP-203ENST00000417982 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
PCTP-203ENST00000417982 PRDM2Q13029 1718 aa31.89■■■□□ 2.7
PCTP-203ENST00000417982 CUX1P39880 1505 aa31.87■■■□□ 2.69
PCTP-203ENST00000417982 UBTFP17480 764 aaKnown RBP31.81■■■□□ 2.68
PCTP-203ENST00000417982 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
PCTP-203ENST00000417982 RAPGEF2Q9Y4G8 1499 aa31.7■■■□□ 2.67
PCTP-203ENST00000417982 PPARGC1BQ86YN6 1023 aaKnown RBP31.68■■■□□ 2.66
PCTP-203ENST00000417982 PRXQ9BXM0 1461 aa31.61■■■□□ 2.65
PCTP-203ENST00000417982 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
PCTP-203ENST00000417982 CLIP1P30622 1438 aa31.57■■■□□ 2.64
PCTP-203ENST00000417982 KIF27Q86VH2 1401 aa31.54■■■□□ 2.64
PCTP-203ENST00000417982 ZEB1P37275 1124 aaPredicted RBP31.48■■■□□ 2.63
PCTP-203ENST00000417982 VPS8Q8N3P4 1428 aa31.42■■■□□ 2.62
PCTP-203ENST00000417982 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
PCTP-203ENST00000417982 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
PCTP-203ENST00000417982 CUX2O14529 1486 aa31.3■■■□□ 2.6
PCTP-203ENST00000417982 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
PCTP-203ENST00000417982 NESP48681 1621 aa31.24■■■□□ 2.59
PCTP-203ENST00000417982 TTBK1Q5TCY1 1321 aaPredicted RBP31.24■■■□□ 2.59
PCTP-203ENST00000417982 IGF1RP08069 1367 aa31.23■■■□□ 2.59
PCTP-203ENST00000417982 LAMC3Q9Y6N6 1575 aa31.21■■■□□ 2.59
PCTP-203ENST00000417982 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
PCTP-203ENST00000417982 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
PCTP-203ENST00000417982 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
PCTP-203ENST00000417982 RANGAP1P46060 587 aaPredicted RBP31.09■■■□□ 2.57
PCTP-203ENST00000417982 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
PCTP-203ENST00000417982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.05■■■□□ 2.56
PCTP-203ENST00000417982 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
PCTP-203ENST00000417982 ARHGAP35Q9NRY4 1499 aa31.03■■■□□ 2.56
PCTP-203ENST00000417982 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
PCTP-203ENST00000417982 APLP2Q06481 763 aa31■■■□□ 2.55
PCTP-203ENST00000417982 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
PCTP-203ENST00000417982 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
PCTP-203ENST00000417982 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
PCTP-203ENST00000417982 WDR97A6NE52 1622 aa30.93■■■□□ 2.54
PCTP-203ENST00000417982 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
PCTP-203ENST00000417982 CUL7Q14999 1698 aa30.86■■■□□ 2.53
PCTP-203ENST00000417982 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
PCTP-203ENST00000417982 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
PCTP-203ENST00000417982 KANK4Q5T7N3 995 aaPredicted RBP30.75■■■□□ 2.51
PCTP-203ENST00000417982 MAP3K1Q13233 1512 aa30.7■■■□□ 2.51
PCTP-203ENST00000417982 HNRNPUL2Q1KMD3 747 aaKnown RBP30.69■■■□□ 2.5
PCTP-203ENST00000417982 CTTNBP2Q8WZ74 1663 aa30.66■■■□□ 2.5
PCTP-203ENST00000417982 RRBP1Q9P2E9 1410 aaKnown RBP30.65■■■□□ 2.5
PCTP-203ENST00000417982 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
PCTP-203ENST00000417982 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
PCTP-203ENST00000417982 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms