RNA–Protein interactions for RNA: ENST00000417485.6

AC012668.3-202, humanhuman

TSL 5 BASIC

Gene AC012668.3, Length 1,642 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012668.3-202ENST00000417485 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
AC012668.3-202ENST00000417485 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
AC012668.3-202ENST00000417485 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
AC012668.3-202ENST00000417485 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
AC012668.3-202ENST00000417485 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
AC012668.3-202ENST00000417485 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
AC012668.3-202ENST00000417485 FOXD1Q16676 465 aa15.52■□□□□ 0.08
AC012668.3-202ENST00000417485 MSH5O43196 834 aa15.04■□□□□ -0
AC012668.3-202ENST00000417485 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
AC012668.3-202ENST00000417485 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
AC012668.3-202ENST00000417485 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
AC012668.3-202ENST00000417485 ADRA2BP18089 450 aa14.06□□□□□ -0.16
AC012668.3-202ENST00000417485 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
AC012668.3-202ENST00000417485 ABCC9O60706 1549 aa13.94□□□□□ -0.18
AC012668.3-202ENST00000417485 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
AC012668.3-202ENST00000417485 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
AC012668.3-202ENST00000417485 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
AC012668.3-202ENST00000417485 RB1CC1Q8TDY2 1594 aa13.27□□□□□ -0.29
AC012668.3-202ENST00000417485 NACADO15069 1562 aa13.26□□□□□ -0.29
AC012668.3-202ENST00000417485 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
AC012668.3-202ENST00000417485 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
AC012668.3-202ENST00000417485 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
AC012668.3-202ENST00000417485 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
AC012668.3-202ENST00000417485 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC012668.3-202ENST00000417485 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
AC012668.3-202ENST00000417485 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
AC012668.3-202ENST00000417485 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
AC012668.3-202ENST00000417485 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
AC012668.3-202ENST00000417485 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
AC012668.3-202ENST00000417485 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
AC012668.3-202ENST00000417485 KCNA4P22459 653 aa12.85□□□□□ -0.35
AC012668.3-202ENST00000417485 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
AC012668.3-202ENST00000417485 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
AC012668.3-202ENST00000417485 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
AC012668.3-202ENST00000417485 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
AC012668.3-202ENST00000417485 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
AC012668.3-202ENST00000417485 POTEHQ6S545 545 aa12.6□□□□□ -0.39
AC012668.3-202ENST00000417485 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
AC012668.3-202ENST00000417485 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
AC012668.3-202ENST00000417485 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
AC012668.3-202ENST00000417485 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
AC012668.3-202ENST00000417485 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
AC012668.3-202ENST00000417485 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
AC012668.3-202ENST00000417485 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
AC012668.3-202ENST00000417485 WIZO95785 1651 aa12.45□□□□□ -0.42
AC012668.3-202ENST00000417485 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
AC012668.3-202ENST00000417485 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
AC012668.3-202ENST00000417485 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
AC012668.3-202ENST00000417485 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
AC012668.3-202ENST00000417485 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
AC012668.3-202ENST00000417485 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
AC012668.3-202ENST00000417485 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
AC012668.3-202ENST00000417485 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
AC012668.3-202ENST00000417485 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
AC012668.3-202ENST00000417485 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
AC012668.3-202ENST00000417485 NCAPD3P42695 1498 aa12.26□□□□□ -0.45
AC012668.3-202ENST00000417485 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
AC012668.3-202ENST00000417485 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
AC012668.3-202ENST00000417485 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
AC012668.3-202ENST00000417485 NESP48681 1621 aa12.15□□□□□ -0.46
AC012668.3-202ENST00000417485 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
AC012668.3-202ENST00000417485 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
AC012668.3-202ENST00000417485 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
AC012668.3-202ENST00000417485 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
AC012668.3-202ENST00000417485 CFTRP13569 1480 aa11.9□□□□□ -0.5
AC012668.3-202ENST00000417485 ERCC6Q03468 1493 aa11.9□□□□□ -0.51
AC012668.3-202ENST00000417485 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
AC012668.3-202ENST00000417485 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
AC012668.3-202ENST00000417485 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
AC012668.3-202ENST00000417485 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
AC012668.3-202ENST00000417485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC012668.3-202ENST00000417485 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
AC012668.3-202ENST00000417485 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
AC012668.3-202ENST00000417485 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
AC012668.3-202ENST00000417485 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
AC012668.3-202ENST00000417485 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
AC012668.3-202ENST00000417485 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
AC012668.3-202ENST00000417485 ZBTB22O15209 634 aa11.78□□□□□ -0.52
AC012668.3-202ENST00000417485 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
AC012668.3-202ENST00000417485 CUX1P39880 1505 aa11.72□□□□□ -0.53
AC012668.3-202ENST00000417485 SYNJ1O43426 1573 aa11.71□□□□□ -0.54
AC012668.3-202ENST00000417485 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
AC012668.3-202ENST00000417485 WDR62O43379 1518 aa11.68□□□□□ -0.54
AC012668.3-202ENST00000417485 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
AC012668.3-202ENST00000417485 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
AC012668.3-202ENST00000417485 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
AC012668.3-202ENST00000417485 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
AC012668.3-202ENST00000417485 CUX2O14529 1486 aa11.64□□□□□ -0.55
AC012668.3-202ENST00000417485 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
AC012668.3-202ENST00000417485 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
AC012668.3-202ENST00000417485 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
AC012668.3-202ENST00000417485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
AC012668.3-202ENST00000417485 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
AC012668.3-202ENST00000417485 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
AC012668.3-202ENST00000417485 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
AC012668.3-202ENST00000417485 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
AC012668.3-202ENST00000417485 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
AC012668.3-202ENST00000417485 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
AC012668.3-202ENST00000417485 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
AC012668.3-202ENST00000417485 SOGA1O94964 1423 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms