RNA–Protein interactions for RNA: ENST00000417387.1

CASD1-202, Transcript of CAS1 domain containing 1, humanhuman

TSL 3

Gene CASD1, Length 352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-202ENST00000417387 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
CASD1-202ENST00000417387 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
CASD1-202ENST00000417387 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
CASD1-202ENST00000417387 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
CASD1-202ENST00000417387 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
CASD1-202ENST00000417387 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
CASD1-202ENST00000417387 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
CASD1-202ENST00000417387 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
CASD1-202ENST00000417387 ABCC9O60706 1549 aa24.57■■□□□ 1.52
CASD1-202ENST00000417387 NACADO15069 1562 aa24.54■■□□□ 1.52
CASD1-202ENST00000417387 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
CASD1-202ENST00000417387 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
CASD1-202ENST00000417387 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
CASD1-202ENST00000417387 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
CASD1-202ENST00000417387 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
CASD1-202ENST00000417387 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
CASD1-202ENST00000417387 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
CASD1-202ENST00000417387 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
CASD1-202ENST00000417387 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
CASD1-202ENST00000417387 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
CASD1-202ENST00000417387 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
CASD1-202ENST00000417387 WIZO95785 1651 aa23.36■■□□□ 1.33
CASD1-202ENST00000417387 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
CASD1-202ENST00000417387 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
CASD1-202ENST00000417387 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
CASD1-202ENST00000417387 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
CASD1-202ENST00000417387 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
CASD1-202ENST00000417387 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
CASD1-202ENST00000417387 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
CASD1-202ENST00000417387 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
CASD1-202ENST00000417387 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
CASD1-202ENST00000417387 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
CASD1-202ENST00000417387 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
CASD1-202ENST00000417387 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
CASD1-202ENST00000417387 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
CASD1-202ENST00000417387 ABCC8Q09428 1581 aa22.39■■□□□ 1.18
CASD1-202ENST00000417387 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
CASD1-202ENST00000417387 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
CASD1-202ENST00000417387 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
CASD1-202ENST00000417387 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
CASD1-202ENST00000417387 CFTRP13569 1480 aa22.13■■□□□ 1.13
CASD1-202ENST00000417387 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
CASD1-202ENST00000417387 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
CASD1-202ENST00000417387 EEA1Q15075 1411 aa21.95■■□□□ 1.1
CASD1-202ENST00000417387 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
CASD1-202ENST00000417387 CUX1P39880 1505 aa21.94■■□□□ 1.1
CASD1-202ENST00000417387 SOGA1O94964 1423 aa21.89■■□□□ 1.1
CASD1-202ENST00000417387 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
CASD1-202ENST00000417387 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
CASD1-202ENST00000417387 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
CASD1-202ENST00000417387 KIF21BO75037 1637 aa21.84■■□□□ 1.09
CASD1-202ENST00000417387 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
CASD1-202ENST00000417387 NESP48681 1621 aa21.72■■□□□ 1.07
CASD1-202ENST00000417387 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
CASD1-202ENST00000417387 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
CASD1-202ENST00000417387 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
CASD1-202ENST00000417387 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
CASD1-202ENST00000417387 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
CASD1-202ENST00000417387 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
CASD1-202ENST00000417387 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
CASD1-202ENST00000417387 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
CASD1-202ENST00000417387 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
CASD1-202ENST00000417387 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
CASD1-202ENST00000417387 TOPBP1Q92547 1522 aa21.58■■□□□ 1.04
CASD1-202ENST00000417387 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
CASD1-202ENST00000417387 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
CASD1-202ENST00000417387 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
CASD1-202ENST00000417387 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
CASD1-202ENST00000417387 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
CASD1-202ENST00000417387 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
CASD1-202ENST00000417387 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
CASD1-202ENST00000417387 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
CASD1-202ENST00000417387 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
CASD1-202ENST00000417387 CUX2O14529 1486 aa21.42■■□□□ 1.02
CASD1-202ENST00000417387 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
CASD1-202ENST00000417387 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
CASD1-202ENST00000417387 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
CASD1-202ENST00000417387 CUL7Q14999 1698 aa21.37■■□□□ 1.01
CASD1-202ENST00000417387 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
CASD1-202ENST00000417387 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
CASD1-202ENST00000417387 WDR62O43379 1518 aa21.29■■□□□ 1
CASD1-202ENST00000417387 PBRM1Q86U86 1689 aa21.29■■□□□ 1
CASD1-202ENST00000417387 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
CASD1-202ENST00000417387 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
CASD1-202ENST00000417387 IGF1RP08069 1367 aa21.27■■□□□ 1
CASD1-202ENST00000417387 CLIP1P30622 1438 aa21.24■□□□□ 0.99
CASD1-202ENST00000417387 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
CASD1-202ENST00000417387 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
CASD1-202ENST00000417387 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
CASD1-202ENST00000417387 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.98
CASD1-202ENST00000417387 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
CASD1-202ENST00000417387 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
CASD1-202ENST00000417387 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
CASD1-202ENST00000417387 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.97
CASD1-202ENST00000417387 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
CASD1-202ENST00000417387 IFT140Q96RY7 1462 aa21.05■□□□□ 0.96
CASD1-202ENST00000417387 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
CASD1-202ENST00000417387 FOXD1Q16676 465 aa21.02■□□□□ 0.96
CASD1-202ENST00000417387 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
CASD1-202ENST00000417387 SAMD9Q5K651 1589 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 372 ms