RNA–Protein interactions for RNA: ENST00000417213.1

AC009229.2-201, humanhuman

TSL 3 BASIC

Gene AC009229.2, Length 351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009229.2-201ENST00000417213 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
AC009229.2-201ENST00000417213 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.15
AC009229.2-201ENST00000417213 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
AC009229.2-201ENST00000417213 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
AC009229.2-201ENST00000417213 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
AC009229.2-201ENST00000417213 ABCC9O60706 1549 aa13.16□□□□□ -0.3
AC009229.2-201ENST00000417213 NACADO15069 1562 aa13.07□□□□□ -0.32
AC009229.2-201ENST00000417213 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
AC009229.2-201ENST00000417213 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
AC009229.2-201ENST00000417213 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
AC009229.2-201ENST00000417213 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
AC009229.2-201ENST00000417213 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
AC009229.2-201ENST00000417213 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
AC009229.2-201ENST00000417213 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
AC009229.2-201ENST00000417213 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
AC009229.2-201ENST00000417213 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
AC009229.2-201ENST00000417213 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
AC009229.2-201ENST00000417213 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
AC009229.2-201ENST00000417213 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
AC009229.2-201ENST00000417213 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC009229.2-201ENST00000417213 WIZO95785 1651 aa12.39□□□□□ -0.43
AC009229.2-201ENST00000417213 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
AC009229.2-201ENST00000417213 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
AC009229.2-201ENST00000417213 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
AC009229.2-201ENST00000417213 CHIC1Q5VXU3 224 aa12.19□□□□□ -0.46
AC009229.2-201ENST00000417213 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
AC009229.2-201ENST00000417213 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
AC009229.2-201ENST00000417213 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
AC009229.2-201ENST00000417213 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
AC009229.2-201ENST00000417213 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
AC009229.2-201ENST00000417213 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
AC009229.2-201ENST00000417213 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
AC009229.2-201ENST00000417213 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
AC009229.2-201ENST00000417213 CFTRP13569 1480 aa11.83□□□□□ -0.52
AC009229.2-201ENST00000417213 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
AC009229.2-201ENST00000417213 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
AC009229.2-201ENST00000417213 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
AC009229.2-201ENST00000417213 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
AC009229.2-201ENST00000417213 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
AC009229.2-201ENST00000417213 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
AC009229.2-201ENST00000417213 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
AC009229.2-201ENST00000417213 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
AC009229.2-201ENST00000417213 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
AC009229.2-201ENST00000417213 CUX1P39880 1505 aa11.68□□□□□ -0.54
AC009229.2-201ENST00000417213 SOGA1O94964 1423 aa11.66□□□□□ -0.54
AC009229.2-201ENST00000417213 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.55
AC009229.2-201ENST00000417213 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
AC009229.2-201ENST00000417213 NESP48681 1621 aa11.64□□□□□ -0.55
AC009229.2-201ENST00000417213 EEA1Q15075 1411 aa11.6□□□□□ -0.55
AC009229.2-201ENST00000417213 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
AC009229.2-201ENST00000417213 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
AC009229.2-201ENST00000417213 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
AC009229.2-201ENST00000417213 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
AC009229.2-201ENST00000417213 KIF21BO75037 1637 aa11.51□□□□□ -0.57
AC009229.2-201ENST00000417213 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
AC009229.2-201ENST00000417213 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
AC009229.2-201ENST00000417213 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
AC009229.2-201ENST00000417213 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
AC009229.2-201ENST00000417213 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
AC009229.2-201ENST00000417213 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
AC009229.2-201ENST00000417213 PRXQ9BXM0 1461 aa11.46□□□□□ -0.57
AC009229.2-201ENST00000417213 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
AC009229.2-201ENST00000417213 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
AC009229.2-201ENST00000417213 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
AC009229.2-201ENST00000417213 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
AC009229.2-201ENST00000417213 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
AC009229.2-201ENST00000417213 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
AC009229.2-201ENST00000417213 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
AC009229.2-201ENST00000417213 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
AC009229.2-201ENST00000417213 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
AC009229.2-201ENST00000417213 IGF1RP08069 1367 aa11.4□□□□□ -0.59
AC009229.2-201ENST00000417213 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
AC009229.2-201ENST00000417213 CUX2O14529 1486 aa11.38□□□□□ -0.59
AC009229.2-201ENST00000417213 MRC2Q9UBG0 1479 aa11.36□□□□□ -0.59
AC009229.2-201ENST00000417213 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
AC009229.2-201ENST00000417213 WDR62O43379 1518 aa11.35□□□□□ -0.59
AC009229.2-201ENST00000417213 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
AC009229.2-201ENST00000417213 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
AC009229.2-201ENST00000417213 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
AC009229.2-201ENST00000417213 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
AC009229.2-201ENST00000417213 CUL7Q14999 1698 aa11.27□□□□□ -0.6
AC009229.2-201ENST00000417213 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
AC009229.2-201ENST00000417213 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
AC009229.2-201ENST00000417213 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
AC009229.2-201ENST00000417213 CLIP1P30622 1438 aa11.24□□□□□ -0.61
AC009229.2-201ENST00000417213 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
AC009229.2-201ENST00000417213 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
AC009229.2-201ENST00000417213 ARAP1Q96P48 1450 aa11.22□□□□□ -0.61
AC009229.2-201ENST00000417213 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
AC009229.2-201ENST00000417213 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
AC009229.2-201ENST00000417213 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
AC009229.2-201ENST00000417213 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
AC009229.2-201ENST00000417213 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
AC009229.2-201ENST00000417213 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
AC009229.2-201ENST00000417213 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
AC009229.2-201ENST00000417213 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
AC009229.2-201ENST00000417213 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
AC009229.2-201ENST00000417213 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
AC009229.2-201ENST00000417213 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
AC009229.2-201ENST00000417213 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms