RNA–Protein interactions for RNA: ENST00000417096.5

AC007879.3-201, humanhuman

TSL 4 BASIC

Gene AC007879.3, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-201ENST00000417096 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
AC007879.3-201ENST00000417096 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
AC007879.3-201ENST00000417096 ABCC9O60706 1549 aa16.17■□□□□ 0.18
AC007879.3-201ENST00000417096 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
AC007879.3-201ENST00000417096 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
AC007879.3-201ENST00000417096 NACADO15069 1562 aa15.28■□□□□ 0.04
AC007879.3-201ENST00000417096 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
AC007879.3-201ENST00000417096 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
AC007879.3-201ENST00000417096 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
AC007879.3-201ENST00000417096 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
AC007879.3-201ENST00000417096 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
AC007879.3-201ENST00000417096 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
AC007879.3-201ENST00000417096 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC007879.3-201ENST00000417096 ZCCHC6Q5VYS8 1495 aaKnown RBP14.95□□□□□ -0.02
AC007879.3-201ENST00000417096 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
AC007879.3-201ENST00000417096 SCRIBQ14160 1630 aa14.79□□□□□ -0.04
AC007879.3-201ENST00000417096 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
AC007879.3-201ENST00000417096 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
AC007879.3-201ENST00000417096 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
AC007879.3-201ENST00000417096 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
AC007879.3-201ENST00000417096 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
AC007879.3-201ENST00000417096 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
AC007879.3-201ENST00000417096 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
AC007879.3-201ENST00000417096 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
AC007879.3-201ENST00000417096 SMARCA2P51531 1590 aa14.02□□□□□ -0.16
AC007879.3-201ENST00000417096 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
AC007879.3-201ENST00000417096 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
AC007879.3-201ENST00000417096 CUX2O14529 1486 aa13.95□□□□□ -0.18
AC007879.3-201ENST00000417096 ERCC6Q03468 1493 aa13.93□□□□□ -0.18
AC007879.3-201ENST00000417096 NESP48681 1621 aa13.91□□□□□ -0.18
AC007879.3-201ENST00000417096 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
AC007879.3-201ENST00000417096 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
AC007879.3-201ENST00000417096 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
AC007879.3-201ENST00000417096 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
AC007879.3-201ENST00000417096 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
AC007879.3-201ENST00000417096 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
AC007879.3-201ENST00000417096 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
AC007879.3-201ENST00000417096 WIZO95785 1651 aa13.75□□□□□ -0.21
AC007879.3-201ENST00000417096 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
AC007879.3-201ENST00000417096 WDR62O43379 1518 aa13.6□□□□□ -0.23
AC007879.3-201ENST00000417096 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
AC007879.3-201ENST00000417096 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
AC007879.3-201ENST00000417096 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
AC007879.3-201ENST00000417096 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
AC007879.3-201ENST00000417096 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
AC007879.3-201ENST00000417096 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
AC007879.3-201ENST00000417096 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
AC007879.3-201ENST00000417096 FANCD2Q9BXW9 1451 aa13.5□□□□□ -0.25
AC007879.3-201ENST00000417096 CFTRP13569 1480 aa13.48□□□□□ -0.25
AC007879.3-201ENST00000417096 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
AC007879.3-201ENST00000417096 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
AC007879.3-201ENST00000417096 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
AC007879.3-201ENST00000417096 EIF4G3O43432 1585 aaKnown RBP13.27□□□□□ -0.29
AC007879.3-201ENST00000417096 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
AC007879.3-201ENST00000417096 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
AC007879.3-201ENST00000417096 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
AC007879.3-201ENST00000417096 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
AC007879.3-201ENST00000417096 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
AC007879.3-201ENST00000417096 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
AC007879.3-201ENST00000417096 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
AC007879.3-201ENST00000417096 CHD1O14646 1710 aa13.22□□□□□ -0.29
AC007879.3-201ENST00000417096 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
AC007879.3-201ENST00000417096 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
AC007879.3-201ENST00000417096 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
AC007879.3-201ENST00000417096 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
AC007879.3-201ENST00000417096 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
AC007879.3-201ENST00000417096 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
AC007879.3-201ENST00000417096 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
AC007879.3-201ENST00000417096 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC007879.3-201ENST00000417096 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
AC007879.3-201ENST00000417096 CUX1P39880 1505 aa13.05□□□□□ -0.32
AC007879.3-201ENST00000417096 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
AC007879.3-201ENST00000417096 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
AC007879.3-201ENST00000417096 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
AC007879.3-201ENST00000417096 ARAP1Q96P48 1450 aa13□□□□□ -0.33
AC007879.3-201ENST00000417096 CLASP1Q7Z460 1538 aa12.99□□□□□ -0.33
AC007879.3-201ENST00000417096 SOGA1O94964 1423 aa12.98□□□□□ -0.33
AC007879.3-201ENST00000417096 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
AC007879.3-201ENST00000417096 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.33
AC007879.3-201ENST00000417096 FOXD1Q16676 465 aa12.95□□□□□ -0.34
AC007879.3-201ENST00000417096 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
AC007879.3-201ENST00000417096 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
AC007879.3-201ENST00000417096 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
AC007879.3-201ENST00000417096 FBLN2P98095 1184 aa12.9□□□□□ -0.34
AC007879.3-201ENST00000417096 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
AC007879.3-201ENST00000417096 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
AC007879.3-201ENST00000417096 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
AC007879.3-201ENST00000417096 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
AC007879.3-201ENST00000417096 CYB5RLQ6IPT4 315 aa12.87□□□□□ -0.35
AC007879.3-201ENST00000417096 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
AC007879.3-201ENST00000417096 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
AC007879.3-201ENST00000417096 CHMP7Q8WUX9 453 aaPredicted RBP12.8□□□□□ -0.36
AC007879.3-201ENST00000417096 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
AC007879.3-201ENST00000417096 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
AC007879.3-201ENST00000417096 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
AC007879.3-201ENST00000417096 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
AC007879.3-201ENST00000417096 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
AC007879.3-201ENST00000417096 WRNQ14191 1432 aaPredicted RBP eCLIP12.77□□□□□ -0.37
AC007879.3-201ENST00000417096 NUP160Q12769 1436 aa12.74□□□□□ -0.37
AC007879.3-201ENST00000417096 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms