RNA–Protein interactions for RNA: ENST00000416492.5

AFF3-205, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-205ENST00000416492 NISCHQ9Y2I1 1504 aa36.06■■■■□ 3.36
AFF3-205ENST00000416492 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
AFF3-205ENST00000416492 ABCC9O60706 1549 aa30.67■■■□□ 2.5
AFF3-205ENST00000416492 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
AFF3-205ENST00000416492 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
AFF3-205ENST00000416492 NACADO15069 1562 aa29.94■■■□□ 2.38
AFF3-205ENST00000416492 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
AFF3-205ENST00000416492 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
AFF3-205ENST00000416492 RB1CC1Q8TDY2 1594 aa29.87■■■□□ 2.37
AFF3-205ENST00000416492 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
AFF3-205ENST00000416492 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
AFF3-205ENST00000416492 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
AFF3-205ENST00000416492 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
AFF3-205ENST00000416492 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
AFF3-205ENST00000416492 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
AFF3-205ENST00000416492 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
AFF3-205ENST00000416492 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
AFF3-205ENST00000416492 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
AFF3-205ENST00000416492 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
AFF3-205ENST00000416492 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
AFF3-205ENST00000416492 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
AFF3-205ENST00000416492 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
AFF3-205ENST00000416492 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
AFF3-205ENST00000416492 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
AFF3-205ENST00000416492 HMGXB3Q12766 1538 aa27.53■■■□□ 2
AFF3-205ENST00000416492 NCAPD3P42695 1498 aa27.53■■■□□ 2
AFF3-205ENST00000416492 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
AFF3-205ENST00000416492 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
AFF3-205ENST00000416492 WIZO95785 1651 aa27.48■■□□□ 1.99
AFF3-205ENST00000416492 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
AFF3-205ENST00000416492 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
AFF3-205ENST00000416492 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
AFF3-205ENST00000416492 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
AFF3-205ENST00000416492 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
AFF3-205ENST00000416492 CFTRP13569 1480 aa26.69■■□□□ 1.86
AFF3-205ENST00000416492 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
AFF3-205ENST00000416492 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
AFF3-205ENST00000416492 NESP48681 1621 aa26.61■■□□□ 1.85
AFF3-205ENST00000416492 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
AFF3-205ENST00000416492 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
AFF3-205ENST00000416492 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
AFF3-205ENST00000416492 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
AFF3-205ENST00000416492 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
AFF3-205ENST00000416492 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
AFF3-205ENST00000416492 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
AFF3-205ENST00000416492 WDR62O43379 1518 aa26.17■■□□□ 1.78
AFF3-205ENST00000416492 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
AFF3-205ENST00000416492 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
AFF3-205ENST00000416492 CUX2O14529 1486 aa26.1■■□□□ 1.77
AFF3-205ENST00000416492 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
AFF3-205ENST00000416492 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
AFF3-205ENST00000416492 CUX1P39880 1505 aa26.01■■□□□ 1.75
AFF3-205ENST00000416492 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
AFF3-205ENST00000416492 TOP2BQ02880 1626 aa26■■□□□ 1.75
AFF3-205ENST00000416492 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
AFF3-205ENST00000416492 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
AFF3-205ENST00000416492 POLA1P09884 1462 aaPredicted RBP25.88■■□□□ 1.73
AFF3-205ENST00000416492 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
AFF3-205ENST00000416492 SOGA1O94964 1423 aa25.79■■□□□ 1.72
AFF3-205ENST00000416492 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
AFF3-205ENST00000416492 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
AFF3-205ENST00000416492 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
AFF3-205ENST00000416492 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
AFF3-205ENST00000416492 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
AFF3-205ENST00000416492 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
AFF3-205ENST00000416492 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
AFF3-205ENST00000416492 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
AFF3-205ENST00000416492 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
AFF3-205ENST00000416492 ZNF608Q9ULD9 1512 aaPredicted RBP25.55■■□□□ 1.68
AFF3-205ENST00000416492 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
AFF3-205ENST00000416492 TDRD9Q8NDG6 1382 aaKnown RBP25.51■■□□□ 1.67
AFF3-205ENST00000416492 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
AFF3-205ENST00000416492 GRIN2BQ13224 1484 aa25.49■■□□□ 1.67
AFF3-205ENST00000416492 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.67
AFF3-205ENST00000416492 EEA1Q15075 1411 aa25.46■■□□□ 1.67
AFF3-205ENST00000416492 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
AFF3-205ENST00000416492 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
AFF3-205ENST00000416492 CUL7Q14999 1698 aa25.37■■□□□ 1.65
AFF3-205ENST00000416492 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
AFF3-205ENST00000416492 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
AFF3-205ENST00000416492 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
AFF3-205ENST00000416492 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
AFF3-205ENST00000416492 IGF1RP08069 1367 aa25.24■■□□□ 1.63
AFF3-205ENST00000416492 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
AFF3-205ENST00000416492 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
AFF3-205ENST00000416492 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
AFF3-205ENST00000416492 CARMIL1Q5VZK9 1371 aa25.18■■□□□ 1.62
AFF3-205ENST00000416492 CHD1O14646 1710 aa25.18■■□□□ 1.62
AFF3-205ENST00000416492 FBLN2P98095 1184 aa25.15■■□□□ 1.62
AFF3-205ENST00000416492 GRIN2AQ12879 1464 aa25.14■■□□□ 1.61
AFF3-205ENST00000416492 RAPGEF2Q9Y4G8 1499 aa25.14■■□□□ 1.61
AFF3-205ENST00000416492 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
AFF3-205ENST00000416492 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
AFF3-205ENST00000416492 KIF21BO75037 1637 aa25.09■■□□□ 1.61
AFF3-205ENST00000416492 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
AFF3-205ENST00000416492 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
AFF3-205ENST00000416492 NUP160Q12769 1436 aa24.98■■□□□ 1.59
AFF3-205ENST00000416492 CEP170Q5SW79 1584 aa24.94■■□□□ 1.58
AFF3-205ENST00000416492 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
AFF3-205ENST00000416492 KIAA0586Q9BVV6 1533 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms