RNA–Protein interactions for RNA: ENST00000416337.1

RTL10-204, Transcript of retrotransposon Gag like 10, humanhuman

APPRIS ALT2 TSL 2

Gene RTL10, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL10-204ENST00000416337 NISCHQ9Y2I1 1504 aa47.76■■■■■ 5.24
RTL10-204ENST00000416337 ABCC9O60706 1549 aa43.03■■■■■ 4.48
RTL10-204ENST00000416337 CCDC180Q9P1Z9 1646 aa43.03■■■■■ 4.48
RTL10-204ENST00000416337 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
RTL10-204ENST00000416337 NACADO15069 1562 aa40.61■■■■■ 4.09
RTL10-204ENST00000416337 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
RTL10-204ENST00000416337 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
RTL10-204ENST00000416337 UNC13AQ9UPW8 1703 aa40.23■■■■■ 4.03
RTL10-204ENST00000416337 MYO15BQ96JP2 1530 aa39.98■■■■□ 3.99
RTL10-204ENST00000416337 PABPN1Q86U42 306 aaKnown RBP eCLIP39.96■■■■□ 3.99
RTL10-204ENST00000416337 BICRAQ9NZM4 1560 aa39.79■■■■□ 3.96
RTL10-204ENST00000416337 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
RTL10-204ENST00000416337 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
RTL10-204ENST00000416337 SHROOM4Q9ULL8 1493 aa39.17■■■■□ 3.86
RTL10-204ENST00000416337 SCRIBQ14160 1630 aa39.17■■■■□ 3.86
RTL10-204ENST00000416337 CC2D2AQ9P2K1 1620 aa38.93■■■■□ 3.82
RTL10-204ENST00000416337 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
RTL10-204ENST00000416337 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
RTL10-204ENST00000416337 NCAPD3P42695 1498 aa37.43■■■■□ 3.58
RTL10-204ENST00000416337 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
RTL10-204ENST00000416337 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
RTL10-204ENST00000416337 SMARCA2P51531 1590 aa37.25■■■■□ 3.55
RTL10-204ENST00000416337 HMGXB3Q12766 1538 aa37.22■■■■□ 3.55
RTL10-204ENST00000416337 DNAJC5Q9H3Z4 198 aa37.17■■■■□ 3.54
RTL10-204ENST00000416337 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
RTL10-204ENST00000416337 CUX2O14529 1486 aa37.13■■■■□ 3.54
RTL10-204ENST00000416337 BAZ1AQ9NRL2 1556 aaPredicted RBP37.09■■■■□ 3.53
RTL10-204ENST00000416337 BAZ1BQ9UIG0 1483 aaKnown RBP36.97■■■■□ 3.51
RTL10-204ENST00000416337 NESP48681 1621 aa36.96■■■■□ 3.51
RTL10-204ENST00000416337 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
RTL10-204ENST00000416337 MROH2BQ7Z745 1585 aa36.81■■■■□ 3.48
RTL10-204ENST00000416337 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.46
RTL10-204ENST00000416337 THOC2Q8NI27 1593 aaKnown RBP36.68■■■■□ 3.46
RTL10-204ENST00000416337 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
RTL10-204ENST00000416337 WIZO95785 1651 aa36.44■■■■□ 3.42
RTL10-204ENST00000416337 PDS5BQ9NTI5 1447 aa36.39■■■■□ 3.42
RTL10-204ENST00000416337 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
RTL10-204ENST00000416337 MRC2Q9UBG0 1479 aa36.14■■■■□ 3.38
RTL10-204ENST00000416337 WDR62O43379 1518 aa36.08■■■■□ 3.37
RTL10-204ENST00000416337 CEP164Q9UPV0 1460 aa35.98■■■■□ 3.35
RTL10-204ENST00000416337 RSF1Q96T23 1441 aaPredicted RBP35.94■■■■□ 3.34
RTL10-204ENST00000416337 TOP2AP11388 1531 aaKnown RBP35.92■■■■□ 3.34
RTL10-204ENST00000416337 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
RTL10-204ENST00000416337 CFTRP13569 1480 aa35.86■■■■□ 3.33
RTL10-204ENST00000416337 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
RTL10-204ENST00000416337 URB2Q14146 1524 aaKnown RBP35.65■■■■□ 3.3
RTL10-204ENST00000416337 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
RTL10-204ENST00000416337 CCDC88BA6NC98 1476 aa35.46■■■■□ 3.27
RTL10-204ENST00000416337 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
RTL10-204ENST00000416337 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
RTL10-204ENST00000416337 IFT140Q96RY7 1462 aa35.23■■■■□ 3.23
RTL10-204ENST00000416337 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
RTL10-204ENST00000416337 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
RTL10-204ENST00000416337 ABCC8Q09428 1581 aa35.11■■■■□ 3.21
RTL10-204ENST00000416337 EIF4G3O43432 1585 aaKnown RBP35.1■■■■□ 3.21
RTL10-204ENST00000416337 RIMBP3CA6NJZ7 1639 aa35.06■■■■□ 3.2
RTL10-204ENST00000416337 RIMBP3BA6NNM3 1639 aa35.06■■■■□ 3.2
RTL10-204ENST00000416337 RIMBP3Q9UFD9 1639 aa35.06■■■■□ 3.2
RTL10-204ENST00000416337 TARBP1Q13395 1621 aaKnown RBP34.99■■■■□ 3.19
RTL10-204ENST00000416337 CHD1O14646 1710 aa34.95■■■■□ 3.18
RTL10-204ENST00000416337 ARHGEF11O15085 1522 aa34.88■■■■□ 3.17
RTL10-204ENST00000416337 POLA1P09884 1462 aaPredicted RBP34.86■■■■□ 3.17
RTL10-204ENST00000416337 AQRO60306 1485 aaKnown RBP eCLIP34.85■■■■□ 3.175e-10■■■■■ 37.2
RTL10-204ENST00000416337 RAD54L2Q9Y4B4 1467 aa34.72■■■■□ 3.15
RTL10-204ENST00000416337 SOGA1O94964 1423 aa34.64■■■■□ 3.14
RTL10-204ENST00000416337 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
RTL10-204ENST00000416337 WDR97A6NE52 1622 aa34.61■■■■□ 3.13
RTL10-204ENST00000416337 CUX1P39880 1505 aa34.6■■■■□ 3.13
RTL10-204ENST00000416337 FBLN2P98095 1184 aa34.6■■■■□ 3.13
RTL10-204ENST00000416337 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
RTL10-204ENST00000416337 SNAPC4Q5SXM2 1469 aa34.53■■■■□ 3.12
RTL10-204ENST00000416337 ARAP1Q96P48 1450 aa34.52■■■■□ 3.12
RTL10-204ENST00000416337 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
RTL10-204ENST00000416337 MAGI1Q96QZ7 1491 aaPredicted RBP34.43■■■■□ 3.1
RTL10-204ENST00000416337 CLASP1Q7Z460 1538 aa34.43■■■■□ 3.1
RTL10-204ENST00000416337 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
RTL10-204ENST00000416337 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
RTL10-204ENST00000416337 SYNJ1O43426 1573 aa34.38■■■■□ 3.09
RTL10-204ENST00000416337 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
RTL10-204ENST00000416337 SYNJ2O15056 1496 aa34.3■■■■□ 3.08
RTL10-204ENST00000416337 ABCA5Q8WWZ7 1642 aa34.27■■■■□ 3.08
RTL10-204ENST00000416337 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
RTL10-204ENST00000416337 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
RTL10-204ENST00000416337 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
RTL10-204ENST00000416337 TRHP20396 242 aaPredicted RBP34.17■■■■□ 3.06
RTL10-204ENST00000416337 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
RTL10-204ENST00000416337 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
RTL10-204ENST00000416337 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.045e-8■■□□□ 14.3
RTL10-204ENST00000416337 ADAMTS12P58397 1594 aa34.01■■■■□ 3.03
RTL10-204ENST00000416337 GRIN2AQ12879 1464 aa33.97■■■■□ 3.03
RTL10-204ENST00000416337 CEP170Q5SW79 1584 aa33.91■■■■□ 3.02
RTL10-204ENST00000416337 ERCC6L2Q5T890 1561 aa33.89■■■■□ 3.02
RTL10-204ENST00000416337 NUP160Q12769 1436 aa33.85■■■■□ 3.01
RTL10-204ENST00000416337 SHROOM2Q13796 1616 aa33.81■■■■□ 3
RTL10-204ENST00000416337 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
RTL10-204ENST00000416337 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
RTL10-204ENST00000416337 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
RTL10-204ENST00000416337 PRG4Q92954 1404 aaPredicted RBP33.52■■■□□ 2.96
RTL10-204ENST00000416337 KIF13AQ9H1H9 1805 aa33.51■■■□□ 2.96
RTL10-204ENST00000416337 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms