RNA–Protein interactions for RNA: ENST00000416246.5

SNX10-206, Transcript of sorting nexin 10, humanhuman

TSL 2

Gene SNX10, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-206ENST00000416246 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
SNX10-206ENST00000416246 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
SNX10-206ENST00000416246 ABCC9O60706 1549 aa18.02■□□□□ 0.47
SNX10-206ENST00000416246 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
SNX10-206ENST00000416246 NACADO15069 1562 aa17.19■□□□□ 0.34
SNX10-206ENST00000416246 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
SNX10-206ENST00000416246 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
SNX10-206ENST00000416246 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
SNX10-206ENST00000416246 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
SNX10-206ENST00000416246 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX10-206ENST00000416246 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
SNX10-206ENST00000416246 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
SNX10-206ENST00000416246 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
SNX10-206ENST00000416246 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
SNX10-206ENST00000416246 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
SNX10-206ENST00000416246 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
SNX10-206ENST00000416246 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
SNX10-206ENST00000416246 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
SNX10-206ENST00000416246 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
SNX10-206ENST00000416246 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
SNX10-206ENST00000416246 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
SNX10-206ENST00000416246 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
SNX10-206ENST00000416246 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
SNX10-206ENST00000416246 CUX2O14529 1486 aa15.71■□□□□ 0.1
SNX10-206ENST00000416246 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
SNX10-206ENST00000416246 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
SNX10-206ENST00000416246 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
SNX10-206ENST00000416246 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
SNX10-206ENST00000416246 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
SNX10-206ENST00000416246 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
SNX10-206ENST00000416246 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
SNX10-206ENST00000416246 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
SNX10-206ENST00000416246 NESP48681 1621 aa15.43■□□□□ 0.06
SNX10-206ENST00000416246 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
SNX10-206ENST00000416246 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
SNX10-206ENST00000416246 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
SNX10-206ENST00000416246 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
SNX10-206ENST00000416246 CFTRP13569 1480 aa15.2■□□□□ 0.02
SNX10-206ENST00000416246 WDR62O43379 1518 aa15.19■□□□□ 0.02
SNX10-206ENST00000416246 WIZO95785 1651 aa15.19■□□□□ 0.02
SNX10-206ENST00000416246 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
SNX10-206ENST00000416246 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
SNX10-206ENST00000416246 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
SNX10-206ENST00000416246 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
SNX10-206ENST00000416246 OSCARQ8IYS5 282 aa15.03■□□□□ -0
SNX10-206ENST00000416246 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
SNX10-206ENST00000416246 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
SNX10-206ENST00000416246 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
SNX10-206ENST00000416246 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
SNX10-206ENST00000416246 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
SNX10-206ENST00000416246 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
SNX10-206ENST00000416246 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
SNX10-206ENST00000416246 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
SNX10-206ENST00000416246 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
SNX10-206ENST00000416246 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
SNX10-206ENST00000416246 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
SNX10-206ENST00000416246 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
SNX10-206ENST00000416246 SOGA1O94964 1423 aa14.67□□□□□ -0.06
SNX10-206ENST00000416246 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
SNX10-206ENST00000416246 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.067e-6■■□□□ 13.1
SNX10-206ENST00000416246 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
SNX10-206ENST00000416246 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
SNX10-206ENST00000416246 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
SNX10-206ENST00000416246 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
SNX10-206ENST00000416246 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
SNX10-206ENST00000416246 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
SNX10-206ENST00000416246 FBLN2P98095 1184 aa14.57□□□□□ -0.08
SNX10-206ENST00000416246 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
SNX10-206ENST00000416246 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
SNX10-206ENST00000416246 CYB5RLQ6IPT4 315 aa14.56□□□□□ -0.08
SNX10-206ENST00000416246 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
SNX10-206ENST00000416246 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
SNX10-206ENST00000416246 CUX1P39880 1505 aa14.52□□□□□ -0.08
SNX10-206ENST00000416246 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
SNX10-206ENST00000416246 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
SNX10-206ENST00000416246 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
SNX10-206ENST00000416246 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
SNX10-206ENST00000416246 CHD1O14646 1710 aa14.47□□□□□ -0.09
SNX10-206ENST00000416246 GAPVD1Q14C86 1478 aa14.47□□□□□ -0.09
SNX10-206ENST00000416246 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
SNX10-206ENST00000416246 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
SNX10-206ENST00000416246 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.1
SNX10-206ENST00000416246 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
SNX10-206ENST00000416246 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
SNX10-206ENST00000416246 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
SNX10-206ENST00000416246 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
SNX10-206ENST00000416246 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
SNX10-206ENST00000416246 NUP160Q12769 1436 aa14.33□□□□□ -0.11
SNX10-206ENST00000416246 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
SNX10-206ENST00000416246 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
SNX10-206ENST00000416246 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
SNX10-206ENST00000416246 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
SNX10-206ENST00000416246 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
SNX10-206ENST00000416246 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
SNX10-206ENST00000416246 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
SNX10-206ENST00000416246 CEP170Q5SW79 1584 aa14.19□□□□□ -0.14
SNX10-206ENST00000416246 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
SNX10-206ENST00000416246 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
SNX10-206ENST00000416246 IGF1RP08069 1367 aa14.13□□□□□ -0.15
SNX10-206ENST00000416246 KIAA0586Q9BVV6 1533 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms