RNA–Protein interactions for RNA: ENST00000415511.1

MTMR3-206, Transcript of myotubularin related protein 3, humanhuman

TSL 3

Gene MTMR3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-206ENST00000415511 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
MTMR3-206ENST00000415511 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
MTMR3-206ENST00000415511 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
MTMR3-206ENST00000415511 ABCC9O60706 1549 aa16.62■□□□□ 0.25
MTMR3-206ENST00000415511 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
MTMR3-206ENST00000415511 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
MTMR3-206ENST00000415511 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
MTMR3-206ENST00000415511 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
MTMR3-206ENST00000415511 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
MTMR3-206ENST00000415511 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
MTMR3-206ENST00000415511 NACADO15069 1562 aa15.32■□□□□ 0.04
MTMR3-206ENST00000415511 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
MTMR3-206ENST00000415511 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
MTMR3-206ENST00000415511 FOXD1Q16676 465 aa15.17■□□□□ 0.02
MTMR3-206ENST00000415511 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
MTMR3-206ENST00000415511 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
MTMR3-206ENST00000415511 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
MTMR3-206ENST00000415511 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
MTMR3-206ENST00000415511 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
MTMR3-206ENST00000415511 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
MTMR3-206ENST00000415511 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
MTMR3-206ENST00000415511 CUX2O14529 1486 aa14.7□□□□□ -0.06
MTMR3-206ENST00000415511 PLPPR3Q6T4P5 718 aa14.55□□□□□ -0.08
MTMR3-206ENST00000415511 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
MTMR3-206ENST00000415511 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
MTMR3-206ENST00000415511 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
MTMR3-206ENST00000415511 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
MTMR3-206ENST00000415511 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
MTMR3-206ENST00000415511 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
MTMR3-206ENST00000415511 ADRA2BP18089 450 aa14.22□□□□□ -0.13
MTMR3-206ENST00000415511 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
MTMR3-206ENST00000415511 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
MTMR3-206ENST00000415511 MSH5O43196 834 aa14.16□□□□□ -0.14
MTMR3-206ENST00000415511 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
MTMR3-206ENST00000415511 NESP48681 1621 aa14.08□□□□□ -0.15
MTMR3-206ENST00000415511 HMGXB3Q12766 1538 aa14□□□□□ -0.17
MTMR3-206ENST00000415511 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
MTMR3-206ENST00000415511 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
MTMR3-206ENST00000415511 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
MTMR3-206ENST00000415511 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
MTMR3-206ENST00000415511 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
MTMR3-206ENST00000415511 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
MTMR3-206ENST00000415511 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
MTMR3-206ENST00000415511 WDR62O43379 1518 aa13.81□□□□□ -0.2
MTMR3-206ENST00000415511 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
MTMR3-206ENST00000415511 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
MTMR3-206ENST00000415511 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
MTMR3-206ENST00000415511 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.21
MTMR3-206ENST00000415511 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.21
MTMR3-206ENST00000415511 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.21
MTMR3-206ENST00000415511 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
MTMR3-206ENST00000415511 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
MTMR3-206ENST00000415511 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
MTMR3-206ENST00000415511 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
MTMR3-206ENST00000415511 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
MTMR3-206ENST00000415511 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
MTMR3-206ENST00000415511 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
MTMR3-206ENST00000415511 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
MTMR3-206ENST00000415511 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
MTMR3-206ENST00000415511 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
MTMR3-206ENST00000415511 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
MTMR3-206ENST00000415511 RSF1Q96T23 1441 aaPredicted RBP13.38□□□□□ -0.27
MTMR3-206ENST00000415511 CFTRP13569 1480 aa13.37□□□□□ -0.27
MTMR3-206ENST00000415511 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
MTMR3-206ENST00000415511 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
MTMR3-206ENST00000415511 CHD1O14646 1710 aa13.3□□□□□ -0.28
MTMR3-206ENST00000415511 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
MTMR3-206ENST00000415511 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
MTMR3-206ENST00000415511 WIZO95785 1651 aa13.23□□□□□ -0.29
MTMR3-206ENST00000415511 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
MTMR3-206ENST00000415511 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
MTMR3-206ENST00000415511 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
MTMR3-206ENST00000415511 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
MTMR3-206ENST00000415511 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
MTMR3-206ENST00000415511 FBLN2P98095 1184 aa13.11□□□□□ -0.31
MTMR3-206ENST00000415511 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
MTMR3-206ENST00000415511 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
MTMR3-206ENST00000415511 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
MTMR3-206ENST00000415511 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
MTMR3-206ENST00000415511 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
MTMR3-206ENST00000415511 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
MTMR3-206ENST00000415511 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
MTMR3-206ENST00000415511 WDR97A6NE52 1622 aa13□□□□□ -0.33
MTMR3-206ENST00000415511 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
MTMR3-206ENST00000415511 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
MTMR3-206ENST00000415511 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
MTMR3-206ENST00000415511 KIF13AQ9H1H9 1805 aa12.97□□□□□ -0.33
MTMR3-206ENST00000415511 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
MTMR3-206ENST00000415511 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
MTMR3-206ENST00000415511 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
MTMR3-206ENST00000415511 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
MTMR3-206ENST00000415511 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
MTMR3-206ENST00000415511 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
MTMR3-206ENST00000415511 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
MTMR3-206ENST00000415511 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
MTMR3-206ENST00000415511 SOGA1O94964 1423 aa12.88□□□□□ -0.35
MTMR3-206ENST00000415511 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
MTMR3-206ENST00000415511 KDM6BO15054 1643 aa12.81□□□□□ -0.36
MTMR3-206ENST00000415511 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
MTMR3-206ENST00000415511 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms