RNA–Protein interactions for RNA: ENST00000415422.1

AC009110.1-201, humanhuman

TSL 4 BASIC

Gene AC009110.1, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009110.1-201ENST00000415422 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
AC009110.1-201ENST00000415422 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
AC009110.1-201ENST00000415422 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
AC009110.1-201ENST00000415422 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
AC009110.1-201ENST00000415422 FOXD1Q16676 465 aa21.6■■□□□ 1.05
AC009110.1-201ENST00000415422 POTEDQ86YR6 584 aa21■□□□□ 0.95
AC009110.1-201ENST00000415422 MSH5O43196 834 aa20.59■□□□□ 0.89
AC009110.1-201ENST00000415422 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
AC009110.1-201ENST00000415422 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
AC009110.1-201ENST00000415422 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
AC009110.1-201ENST00000415422 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
AC009110.1-201ENST00000415422 ADRA2BP18089 450 aa19.62■□□□□ 0.73
AC009110.1-201ENST00000415422 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
AC009110.1-201ENST00000415422 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
AC009110.1-201ENST00000415422 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
AC009110.1-201ENST00000415422 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
AC009110.1-201ENST00000415422 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
AC009110.1-201ENST00000415422 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
AC009110.1-201ENST00000415422 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
AC009110.1-201ENST00000415422 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
AC009110.1-201ENST00000415422 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
AC009110.1-201ENST00000415422 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
AC009110.1-201ENST00000415422 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
AC009110.1-201ENST00000415422 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
AC009110.1-201ENST00000415422 ABCC9O60706 1549 aa17.06■□□□□ 0.32
AC009110.1-201ENST00000415422 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
AC009110.1-201ENST00000415422 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
AC009110.1-201ENST00000415422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
AC009110.1-201ENST00000415422 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
AC009110.1-201ENST00000415422 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
AC009110.1-201ENST00000415422 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
AC009110.1-201ENST00000415422 NACADO15069 1562 aa16.42■□□□□ 0.22
AC009110.1-201ENST00000415422 POTEHQ6S545 545 aa16.39■□□□□ 0.21
AC009110.1-201ENST00000415422 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
AC009110.1-201ENST00000415422 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
AC009110.1-201ENST00000415422 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
AC009110.1-201ENST00000415422 CAPN15O75808 1086 aa16.13■□□□□ 0.17
AC009110.1-201ENST00000415422 DSG3P32926 999 aa16.11■□□□□ 0.17
AC009110.1-201ENST00000415422 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
AC009110.1-201ENST00000415422 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
AC009110.1-201ENST00000415422 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
AC009110.1-201ENST00000415422 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
AC009110.1-201ENST00000415422 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
AC009110.1-201ENST00000415422 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
AC009110.1-201ENST00000415422 APLP2Q06481 763 aa15.81■□□□□ 0.12
AC009110.1-201ENST00000415422 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
AC009110.1-201ENST00000415422 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
AC009110.1-201ENST00000415422 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
AC009110.1-201ENST00000415422 ABCB7O75027 752 aa15.64■□□□□ 0.09
AC009110.1-201ENST00000415422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
AC009110.1-201ENST00000415422 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
AC009110.1-201ENST00000415422 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
AC009110.1-201ENST00000415422 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
AC009110.1-201ENST00000415422 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
AC009110.1-201ENST00000415422 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
AC009110.1-201ENST00000415422 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
AC009110.1-201ENST00000415422 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
AC009110.1-201ENST00000415422 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
AC009110.1-201ENST00000415422 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
AC009110.1-201ENST00000415422 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
AC009110.1-201ENST00000415422 KCNA4P22459 653 aa15.27■□□□□ 0.04
AC009110.1-201ENST00000415422 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
AC009110.1-201ENST00000415422 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
AC009110.1-201ENST00000415422 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
AC009110.1-201ENST00000415422 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
AC009110.1-201ENST00000415422 POLA2Q14181 598 aa15.12■□□□□ 0.01
AC009110.1-201ENST00000415422 BAZ1BQ9UIG0 1483 aaKnown RBP15.1■□□□□ 0.01
AC009110.1-201ENST00000415422 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
AC009110.1-201ENST00000415422 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
AC009110.1-201ENST00000415422 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
AC009110.1-201ENST00000415422 HMGXB3Q12766 1538 aa15.06■□□□□ 0
AC009110.1-201ENST00000415422 WIZO95785 1651 aa15.05■□□□□ -0
AC009110.1-201ENST00000415422 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
AC009110.1-201ENST00000415422 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
AC009110.1-201ENST00000415422 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
AC009110.1-201ENST00000415422 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
AC009110.1-201ENST00000415422 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
AC009110.1-201ENST00000415422 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
AC009110.1-201ENST00000415422 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
AC009110.1-201ENST00000415422 HAX1O00165 279 aa14.77□□□□□ -0.05
AC009110.1-201ENST00000415422 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
AC009110.1-201ENST00000415422 NESP48681 1621 aa14.76□□□□□ -0.05
AC009110.1-201ENST00000415422 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
AC009110.1-201ENST00000415422 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
AC009110.1-201ENST00000415422 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
AC009110.1-201ENST00000415422 PDS5BQ9NTI5 1447 aa14.69□□□□□ -0.06
AC009110.1-201ENST00000415422 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
AC009110.1-201ENST00000415422 CFTRP13569 1480 aa14.63□□□□□ -0.07
AC009110.1-201ENST00000415422 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
AC009110.1-201ENST00000415422 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
AC009110.1-201ENST00000415422 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
AC009110.1-201ENST00000415422 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
AC009110.1-201ENST00000415422 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
AC009110.1-201ENST00000415422 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
AC009110.1-201ENST00000415422 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
AC009110.1-201ENST00000415422 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
AC009110.1-201ENST00000415422 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
AC009110.1-201ENST00000415422 CUX2O14529 1486 aa14.47□□□□□ -0.09
AC009110.1-201ENST00000415422 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
AC009110.1-201ENST00000415422 WDR62O43379 1518 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms