RNA–Protein interactions for RNA: ENST00000415384.1

AFF3-204, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-204ENST00000415384 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
AFF3-204ENST00000415384 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
AFF3-204ENST00000415384 ABCC9O60706 1549 aa37.12■■■■□ 3.53
AFF3-204ENST00000415384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
AFF3-204ENST00000415384 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
AFF3-204ENST00000415384 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
AFF3-204ENST00000415384 MYO15BQ96JP2 1530 aa36.26■■■■□ 3.4
AFF3-204ENST00000415384 NACADO15069 1562 aa36.23■■■■□ 3.39
AFF3-204ENST00000415384 RB1CC1Q8TDY2 1594 aa36.08■■■■□ 3.37
AFF3-204ENST00000415384 SCRIBQ14160 1630 aa35.42■■■■□ 3.26
AFF3-204ENST00000415384 UNC13AQ9UPW8 1703 aa35.29■■■■□ 3.24
AFF3-204ENST00000415384 SHROOM4Q9ULL8 1493 aa35.28■■■■□ 3.24
AFF3-204ENST00000415384 BICRAQ9NZM4 1560 aa34.93■■■■□ 3.18
AFF3-204ENST00000415384 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
AFF3-204ENST00000415384 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
AFF3-204ENST00000415384 BAZ1AQ9NRL2 1556 aaPredicted RBP34.03■■■■□ 3.04
AFF3-204ENST00000415384 SMARCA4P51532 1647 aa33.95■■■■□ 3.03
AFF3-204ENST00000415384 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
AFF3-204ENST00000415384 MROH2BQ7Z745 1585 aa33.9■■■■□ 3.02
AFF3-204ENST00000415384 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
AFF3-204ENST00000415384 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
AFF3-204ENST00000415384 CC2D2AQ9P2K1 1620 aa33.62■■■□□ 2.97
AFF3-204ENST00000415384 WIZO95785 1651 aa33.61■■■□□ 2.97
AFF3-204ENST00000415384 PEG3Q9GZU2 1588 aa33.59■■■□□ 2.97
AFF3-204ENST00000415384 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
AFF3-204ENST00000415384 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
AFF3-204ENST00000415384 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
AFF3-204ENST00000415384 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
AFF3-204ENST00000415384 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
AFF3-204ENST00000415384 HMGXB3Q12766 1538 aa33.31■■■□□ 2.92
AFF3-204ENST00000415384 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
AFF3-204ENST00000415384 CCDC88BA6NC98 1476 aa32.9■■■□□ 2.86
AFF3-204ENST00000415384 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
AFF3-204ENST00000415384 CFTRP13569 1480 aa32.46■■■□□ 2.79
AFF3-204ENST00000415384 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
AFF3-204ENST00000415384 NESP48681 1621 aa32.36■■■□□ 2.77
AFF3-204ENST00000415384 PRDM2Q13029 1718 aa32.33■■■□□ 2.77
AFF3-204ENST00000415384 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
AFF3-204ENST00000415384 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
AFF3-204ENST00000415384 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
AFF3-204ENST00000415384 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
AFF3-204ENST00000415384 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
AFF3-204ENST00000415384 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
AFF3-204ENST00000415384 CHIC1Q5VXU3 224 aa31.88■■■□□ 2.69
AFF3-204ENST00000415384 WRNQ14191 1432 aaPredicted RBP eCLIP31.87■■■□□ 2.69
AFF3-204ENST00000415384 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
AFF3-204ENST00000415384 CUX1P39880 1505 aa31.75■■■□□ 2.67
AFF3-204ENST00000415384 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
AFF3-204ENST00000415384 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
AFF3-204ENST00000415384 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
AFF3-204ENST00000415384 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
AFF3-204ENST00000415384 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
AFF3-204ENST00000415384 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
AFF3-204ENST00000415384 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
AFF3-204ENST00000415384 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
AFF3-204ENST00000415384 WDR62O43379 1518 aa31.63■■■□□ 2.65
AFF3-204ENST00000415384 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
AFF3-204ENST00000415384 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
AFF3-204ENST00000415384 SOGA1O94964 1423 aa31.4■■■□□ 2.62
AFF3-204ENST00000415384 CUX2O14529 1486 aa31.34■■■□□ 2.61
AFF3-204ENST00000415384 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
AFF3-204ENST00000415384 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
AFF3-204ENST00000415384 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
AFF3-204ENST00000415384 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
AFF3-204ENST00000415384 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
AFF3-204ENST00000415384 KIF27Q86VH2 1401 aa31.16■■■□□ 2.58
AFF3-204ENST00000415384 EEA1Q15075 1411 aa31.12■■■□□ 2.57
AFF3-204ENST00000415384 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
AFF3-204ENST00000415384 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
AFF3-204ENST00000415384 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
AFF3-204ENST00000415384 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
AFF3-204ENST00000415384 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
AFF3-204ENST00000415384 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
AFF3-204ENST00000415384 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.56
AFF3-204ENST00000415384 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
AFF3-204ENST00000415384 CSRNP3Q8WYN3 585 aa30.98■■■□□ 2.55
AFF3-204ENST00000415384 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
AFF3-204ENST00000415384 IGF1RP08069 1367 aa30.92■■■□□ 2.54
AFF3-204ENST00000415384 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
AFF3-204ENST00000415384 ERICH3Q5RHP9 1530 aa30.9■■■□□ 2.54
AFF3-204ENST00000415384 CUL7Q14999 1698 aa30.8■■■□□ 2.52
AFF3-204ENST00000415384 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
AFF3-204ENST00000415384 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
AFF3-204ENST00000415384 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
AFF3-204ENST00000415384 PRXQ9BXM0 1461 aa30.74■■■□□ 2.51
AFF3-204ENST00000415384 KIF21BO75037 1637 aa30.72■■■□□ 2.51
AFF3-204ENST00000415384 FHAD1B1AJZ9 1412 aa30.71■■■□□ 2.51
AFF3-204ENST00000415384 ADAMTS12P58397 1594 aa30.7■■■□□ 2.5
AFF3-204ENST00000415384 RAPGEF2Q9Y4G8 1499 aa30.68■■■□□ 2.5
AFF3-204ENST00000415384 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
AFF3-204ENST00000415384 GOLGA3Q08378 1498 aa30.61■■■□□ 2.49
AFF3-204ENST00000415384 EHMT2Q96KQ7 1210 aa30.6■■■□□ 2.49
AFF3-204ENST00000415384 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
AFF3-204ENST00000415384 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
AFF3-204ENST00000415384 FBLN2P98095 1184 aa30.54■■■□□ 2.48
AFF3-204ENST00000415384 UBTFP17480 764 aaKnown RBP30.52■■■□□ 2.48
AFF3-204ENST00000415384 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
AFF3-204ENST00000415384 CHD1O14646 1710 aa30.48■■■□□ 2.47
AFF3-204ENST00000415384 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
AFF3-204ENST00000415384 CTTNBP2Q8WZ74 1663 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms