RNA–Protein interactions for RNA: ENST00000413960.1

AC010729.1-201, humanhuman

TSL 3 BASIC

Gene AC010729.1, Length 1,746 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010729.1-201ENST00000413960 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
AC010729.1-201ENST00000413960 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
AC010729.1-201ENST00000413960 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
AC010729.1-201ENST00000413960 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
AC010729.1-201ENST00000413960 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
AC010729.1-201ENST00000413960 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
AC010729.1-201ENST00000413960 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
AC010729.1-201ENST00000413960 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
AC010729.1-201ENST00000413960 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
AC010729.1-201ENST00000413960 HRCP23327 699 aa18.3■□□□□ 0.52
AC010729.1-201ENST00000413960 DNAJC5Q9H3Z4 198 aa18.29■□□□□ 0.52
AC010729.1-201ENST00000413960 ABCC9O60706 1549 aa18.03■□□□□ 0.48
AC010729.1-201ENST00000413960 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
AC010729.1-201ENST00000413960 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
AC010729.1-201ENST00000413960 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
AC010729.1-201ENST00000413960 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
AC010729.1-201ENST00000413960 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
AC010729.1-201ENST00000413960 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
AC010729.1-201ENST00000413960 SCRIBQ14160 1630 aa17.58■□□□□ 0.41
AC010729.1-201ENST00000413960 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
AC010729.1-201ENST00000413960 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
AC010729.1-201ENST00000413960 NACADO15069 1562 aa17.51■□□□□ 0.39
AC010729.1-201ENST00000413960 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
AC010729.1-201ENST00000413960 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
AC010729.1-201ENST00000413960 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
AC010729.1-201ENST00000413960 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
AC010729.1-201ENST00000413960 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
AC010729.1-201ENST00000413960 WIZO95785 1651 aa17.19■□□□□ 0.34
AC010729.1-201ENST00000413960 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
AC010729.1-201ENST00000413960 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
AC010729.1-201ENST00000413960 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
AC010729.1-201ENST00000413960 EEA1Q15075 1411 aa17■□□□□ 0.31
AC010729.1-201ENST00000413960 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
AC010729.1-201ENST00000413960 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
AC010729.1-201ENST00000413960 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
AC010729.1-201ENST00000413960 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
AC010729.1-201ENST00000413960 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
AC010729.1-201ENST00000413960 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
AC010729.1-201ENST00000413960 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
AC010729.1-201ENST00000413960 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
AC010729.1-201ENST00000413960 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
AC010729.1-201ENST00000413960 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
AC010729.1-201ENST00000413960 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
AC010729.1-201ENST00000413960 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
AC010729.1-201ENST00000413960 GOLGA3Q08378 1498 aa16.77■□□□□ 0.27
AC010729.1-201ENST00000413960 KIF21BO75037 1637 aa16.75■□□□□ 0.27
AC010729.1-201ENST00000413960 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
AC010729.1-201ENST00000413960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
AC010729.1-201ENST00000413960 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
AC010729.1-201ENST00000413960 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
AC010729.1-201ENST00000413960 MYT1Q01538 1121 aa16.65■□□□□ 0.26
AC010729.1-201ENST00000413960 SOGA1O94964 1423 aa16.65■□□□□ 0.26
AC010729.1-201ENST00000413960 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
AC010729.1-201ENST00000413960 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
AC010729.1-201ENST00000413960 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
AC010729.1-201ENST00000413960 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
AC010729.1-201ENST00000413960 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
AC010729.1-201ENST00000413960 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
AC010729.1-201ENST00000413960 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
AC010729.1-201ENST00000413960 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.23
AC010729.1-201ENST00000413960 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
AC010729.1-201ENST00000413960 CLIP1P30622 1438 aa16.47■□□□□ 0.23
AC010729.1-201ENST00000413960 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.23
AC010729.1-201ENST00000413960 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
AC010729.1-201ENST00000413960 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
AC010729.1-201ENST00000413960 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
AC010729.1-201ENST00000413960 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
AC010729.1-201ENST00000413960 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
AC010729.1-201ENST00000413960 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
AC010729.1-201ENST00000413960 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
AC010729.1-201ENST00000413960 APLP2Q06481 763 aa16.29■□□□□ 0.2
AC010729.1-201ENST00000413960 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
AC010729.1-201ENST00000413960 CUX2O14529 1486 aa16.26■□□□□ 0.19
AC010729.1-201ENST00000413960 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
AC010729.1-201ENST00000413960 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
AC010729.1-201ENST00000413960 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
AC010729.1-201ENST00000413960 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
AC010729.1-201ENST00000413960 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
AC010729.1-201ENST00000413960 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
AC010729.1-201ENST00000413960 MIER1Q8N108 512 aa16.18■□□□□ 0.18
AC010729.1-201ENST00000413960 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
AC010729.1-201ENST00000413960 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
AC010729.1-201ENST00000413960 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
AC010729.1-201ENST00000413960 KIF27Q86VH2 1401 aa16.1■□□□□ 0.17
AC010729.1-201ENST00000413960 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
AC010729.1-201ENST00000413960 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
AC010729.1-201ENST00000413960 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
AC010729.1-201ENST00000413960 CUX1P39880 1505 aa16.07■□□□□ 0.16
AC010729.1-201ENST00000413960 YTHDC1Q96MU7 727 aaKnown RBP16.05■□□□□ 0.16
AC010729.1-201ENST00000413960 CCNB3Q8WWL7 1395 aa16.02■□□□□ 0.15
AC010729.1-201ENST00000413960 CFTRP13569 1480 aa16.01■□□□□ 0.15
AC010729.1-201ENST00000413960 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
AC010729.1-201ENST00000413960 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
AC010729.1-201ENST00000413960 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
AC010729.1-201ENST00000413960 ILDR1Q86SU0 546 aaPredicted RBP15.93■□□□□ 0.14
AC010729.1-201ENST00000413960 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
AC010729.1-201ENST00000413960 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
AC010729.1-201ENST00000413960 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
AC010729.1-201ENST00000413960 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
AC010729.1-201ENST00000413960 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 302.5 ms