RNA–Protein interactions for RNA: ENST00000413000.1

TRNT1-206, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 4

Gene TRNT1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-206ENST00000413000 NISCHQ9Y2I1 1504 aa42.99■■■■■ 4.47
TRNT1-206ENST00000413000 CCDC180Q9P1Z9 1646 aa38.42■■■■□ 3.74
TRNT1-206ENST00000413000 ABCC9O60706 1549 aa38.12■■■■□ 3.69
TRNT1-206ENST00000413000 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
TRNT1-206ENST00000413000 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
TRNT1-206ENST00000413000 NACADO15069 1562 aa36.27■■■■□ 3.4
TRNT1-206ENST00000413000 MYO15BQ96JP2 1530 aa35.85■■■■□ 3.33
TRNT1-206ENST00000413000 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
TRNT1-206ENST00000413000 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
TRNT1-206ENST00000413000 PABPN1Q86U42 306 aaKnown RBP eCLIP35.59■■■■□ 3.29
TRNT1-206ENST00000413000 DCAF1Q9Y4B6 1507 aa35.52■■■■□ 3.28
TRNT1-206ENST00000413000 DNAJC5BQ9UF47 199 aa35.51■■■■□ 3.28
TRNT1-206ENST00000413000 BICRAQ9NZM4 1560 aa35.34■■■■□ 3.25
TRNT1-206ENST00000413000 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
TRNT1-206ENST00000413000 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
TRNT1-206ENST00000413000 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
TRNT1-206ENST00000413000 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.1
TRNT1-206ENST00000413000 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
TRNT1-206ENST00000413000 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
TRNT1-206ENST00000413000 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
TRNT1-206ENST00000413000 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
TRNT1-206ENST00000413000 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
TRNT1-206ENST00000413000 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
TRNT1-206ENST00000413000 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
TRNT1-206ENST00000413000 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
TRNT1-206ENST00000413000 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
TRNT1-206ENST00000413000 BAZ1BQ9UIG0 1483 aaKnown RBP33.11■■■□□ 2.89
TRNT1-206ENST00000413000 ERCC6Q03468 1493 aa32.9■■■□□ 2.86
TRNT1-206ENST00000413000 NESP48681 1621 aa32.84■■■□□ 2.85
TRNT1-206ENST00000413000 WIZO95785 1651 aa32.78■■■□□ 2.84
TRNT1-206ENST00000413000 CUX2O14529 1486 aa32.7■■■□□ 2.83
TRNT1-206ENST00000413000 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
TRNT1-206ENST00000413000 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
TRNT1-206ENST00000413000 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
TRNT1-206ENST00000413000 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
TRNT1-206ENST00000413000 KIF21AQ7Z4S6 1674 aa32.45■■■□□ 2.79
TRNT1-206ENST00000413000 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
TRNT1-206ENST00000413000 DNAJC5Q9H3Z4 198 aa32.39■■■□□ 2.78
TRNT1-206ENST00000413000 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
TRNT1-206ENST00000413000 CFTRP13569 1480 aa32.16■■■□□ 2.74
TRNT1-206ENST00000413000 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
TRNT1-206ENST00000413000 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
TRNT1-206ENST00000413000 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
TRNT1-206ENST00000413000 WDR62O43379 1518 aa32.04■■■□□ 2.72
TRNT1-206ENST00000413000 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
TRNT1-206ENST00000413000 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
TRNT1-206ENST00000413000 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
TRNT1-206ENST00000413000 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
TRNT1-206ENST00000413000 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
TRNT1-206ENST00000413000 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
TRNT1-206ENST00000413000 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
TRNT1-206ENST00000413000 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
TRNT1-206ENST00000413000 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
TRNT1-206ENST00000413000 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
TRNT1-206ENST00000413000 TARBP1Q13395 1621 aaKnown RBP31.22■■■□□ 2.59
TRNT1-206ENST00000413000 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
TRNT1-206ENST00000413000 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
TRNT1-206ENST00000413000 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.583e-9■■■■■ 37.1
TRNT1-206ENST00000413000 SOGA1O94964 1423 aa31.14■■■□□ 2.58
TRNT1-206ENST00000413000 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
TRNT1-206ENST00000413000 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
TRNT1-206ENST00000413000 CUX1P39880 1505 aa31.09■■■□□ 2.57
TRNT1-206ENST00000413000 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
TRNT1-206ENST00000413000 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
TRNT1-206ENST00000413000 CHD1O14646 1710 aa30.95■■■□□ 2.55
TRNT1-206ENST00000413000 FBLN2P98095 1184 aa30.94■■■□□ 2.54
TRNT1-206ENST00000413000 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
TRNT1-206ENST00000413000 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
TRNT1-206ENST00000413000 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
TRNT1-206ENST00000413000 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
TRNT1-206ENST00000413000 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
TRNT1-206ENST00000413000 GRIN2BQ13224 1484 aa30.79■■■□□ 2.52
TRNT1-206ENST00000413000 CHMP7Q8WUX9 453 aaPredicted RBP30.76■■■□□ 2.51
TRNT1-206ENST00000413000 ARHGEF11O15085 1522 aa30.76■■■□□ 2.51
TRNT1-206ENST00000413000 MAGI1Q96QZ7 1491 aaPredicted RBP30.75■■■□□ 2.51
TRNT1-206ENST00000413000 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
TRNT1-206ENST00000413000 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
TRNT1-206ENST00000413000 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
TRNT1-206ENST00000413000 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
TRNT1-206ENST00000413000 BIVM-ERCC5R4GMW8 1640 aa30.7■■■□□ 2.51
TRNT1-206ENST00000413000 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
TRNT1-206ENST00000413000 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
TRNT1-206ENST00000413000 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
TRNT1-206ENST00000413000 SYNJ2O15056 1496 aa30.64■■■□□ 2.5
TRNT1-206ENST00000413000 CYB5RLQ6IPT4 315 aa30.6■■■□□ 2.49
TRNT1-206ENST00000413000 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
TRNT1-206ENST00000413000 ARAP1Q96P48 1450 aa30.47■■■□□ 2.47
TRNT1-206ENST00000413000 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
TRNT1-206ENST00000413000 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
TRNT1-206ENST00000413000 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
TRNT1-206ENST00000413000 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
TRNT1-206ENST00000413000 NUP160Q12769 1436 aa30.26■■■□□ 2.43
TRNT1-206ENST00000413000 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
TRNT1-206ENST00000413000 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
TRNT1-206ENST00000413000 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
TRNT1-206ENST00000413000 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
TRNT1-206ENST00000413000 IGF1RP08069 1367 aa30.1■■■□□ 2.41
TRNT1-206ENST00000413000 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
TRNT1-206ENST00000413000 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
TRNT1-206ENST00000413000 CUL7Q14999 1698 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms