RNA–Protein interactions for RNA: ENST00000412964.6

CCDC138-203, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC138, Length 2,250 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-203ENST00000412964 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
CCDC138-203ENST00000412964 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
CCDC138-203ENST00000412964 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
CCDC138-203ENST00000412964 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
CCDC138-203ENST00000412964 ABCC9O60706 1549 aa26.08■■□□□ 1.77
CCDC138-203ENST00000412964 DCAF1Q9Y4B6 1507 aa25.91■■□□□ 1.74
CCDC138-203ENST00000412964 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
CCDC138-203ENST00000412964 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
CCDC138-203ENST00000412964 NACADO15069 1562 aa25.54■■□□□ 1.68
CCDC138-203ENST00000412964 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
CCDC138-203ENST00000412964 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CCDC138-203ENST00000412964 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
CCDC138-203ENST00000412964 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
CCDC138-203ENST00000412964 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
CCDC138-203ENST00000412964 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
CCDC138-203ENST00000412964 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
CCDC138-203ENST00000412964 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
CCDC138-203ENST00000412964 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
CCDC138-203ENST00000412964 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
CCDC138-203ENST00000412964 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
CCDC138-203ENST00000412964 WIZO95785 1651 aa24.18■■□□□ 1.46
CCDC138-203ENST00000412964 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
CCDC138-203ENST00000412964 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
CCDC138-203ENST00000412964 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
CCDC138-203ENST00000412964 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
CCDC138-203ENST00000412964 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
CCDC138-203ENST00000412964 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
CCDC138-203ENST00000412964 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
CCDC138-203ENST00000412964 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
CCDC138-203ENST00000412964 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
CCDC138-203ENST00000412964 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
CCDC138-203ENST00000412964 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
CCDC138-203ENST00000412964 TRIM41Q8WV44 630 aa23.33■■□□□ 1.32
CCDC138-203ENST00000412964 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
CCDC138-203ENST00000412964 CFTRP13569 1480 aa23.05■■□□□ 1.28
CCDC138-203ENST00000412964 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
CCDC138-203ENST00000412964 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
CCDC138-203ENST00000412964 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
CCDC138-203ENST00000412964 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
CCDC138-203ENST00000412964 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
CCDC138-203ENST00000412964 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
CCDC138-203ENST00000412964 NESP48681 1621 aa22.87■■□□□ 1.25
CCDC138-203ENST00000412964 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
CCDC138-203ENST00000412964 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
CCDC138-203ENST00000412964 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
CCDC138-203ENST00000412964 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
CCDC138-203ENST00000412964 EHMT2Q96KQ7 1210 aa22.77■■□□□ 1.23
CCDC138-203ENST00000412964 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
CCDC138-203ENST00000412964 CUX1P39880 1505 aa22.75■■□□□ 1.23
CCDC138-203ENST00000412964 SOGA1O94964 1423 aa22.75■■□□□ 1.23
CCDC138-203ENST00000412964 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
CCDC138-203ENST00000412964 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
CCDC138-203ENST00000412964 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
CCDC138-203ENST00000412964 EEA1Q15075 1411 aa22.61■■□□□ 1.21
CCDC138-203ENST00000412964 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
CCDC138-203ENST00000412964 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
CCDC138-203ENST00000412964 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
CCDC138-203ENST00000412964 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
CCDC138-203ENST00000412964 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
CCDC138-203ENST00000412964 URB2Q14146 1524 aaKnown RBP22.48■■□□□ 1.19
CCDC138-203ENST00000412964 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
CCDC138-203ENST00000412964 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
CCDC138-203ENST00000412964 CUX2O14529 1486 aa22.41■■□□□ 1.18
CCDC138-203ENST00000412964 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
CCDC138-203ENST00000412964 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
CCDC138-203ENST00000412964 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
CCDC138-203ENST00000412964 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
CCDC138-203ENST00000412964 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
CCDC138-203ENST00000412964 KIF21BO75037 1637 aa22.35■■□□□ 1.17
CCDC138-203ENST00000412964 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
CCDC138-203ENST00000412964 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
CCDC138-203ENST00000412964 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
CCDC138-203ENST00000412964 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
CCDC138-203ENST00000412964 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
CCDC138-203ENST00000412964 WDR62O43379 1518 aa22.21■■□□□ 1.15
CCDC138-203ENST00000412964 IGF1RP08069 1367 aa22.2■■□□□ 1.14
CCDC138-203ENST00000412964 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
CCDC138-203ENST00000412964 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
CCDC138-203ENST00000412964 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
CCDC138-203ENST00000412964 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
CCDC138-203ENST00000412964 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
CCDC138-203ENST00000412964 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CCDC138-203ENST00000412964 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
CCDC138-203ENST00000412964 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
CCDC138-203ENST00000412964 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
CCDC138-203ENST00000412964 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
CCDC138-203ENST00000412964 CUL7Q14999 1698 aa22.05■■□□□ 1.12
CCDC138-203ENST00000412964 CLIP1P30622 1438 aa22.03■■□□□ 1.12
CCDC138-203ENST00000412964 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
CCDC138-203ENST00000412964 PBRM1Q86U86 1689 aa22■■□□□ 1.11
CCDC138-203ENST00000412964 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
CCDC138-203ENST00000412964 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
CCDC138-203ENST00000412964 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
CCDC138-203ENST00000412964 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
CCDC138-203ENST00000412964 CTTNBP2Q8WZ74 1663 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 PCGF6Q9BYE7 350 aa21.82■■□□□ 1.08
CCDC138-203ENST00000412964 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
CCDC138-203ENST00000412964 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms