RNA–Protein interactions for RNA: ENST00000412549.2

AC009542.1-201, humanhuman

TSL 2 BASIC

Gene AC009542.1, Length 1,810 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009542.1-201ENST00000412549 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
AC009542.1-201ENST00000412549 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
AC009542.1-201ENST00000412549 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
AC009542.1-201ENST00000412549 ABCC9O60706 1549 aa26.79■■□□□ 1.88
AC009542.1-201ENST00000412549 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
AC009542.1-201ENST00000412549 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
AC009542.1-201ENST00000412549 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
AC009542.1-201ENST00000412549 NACADO15069 1562 aa26.2■■□□□ 1.78
AC009542.1-201ENST00000412549 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
AC009542.1-201ENST00000412549 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
AC009542.1-201ENST00000412549 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
AC009542.1-201ENST00000412549 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
AC009542.1-201ENST00000412549 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
AC009542.1-201ENST00000412549 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
AC009542.1-201ENST00000412549 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
AC009542.1-201ENST00000412549 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
AC009542.1-201ENST00000412549 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
AC009542.1-201ENST00000412549 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
AC009542.1-201ENST00000412549 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
AC009542.1-201ENST00000412549 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
AC009542.1-201ENST00000412549 WIZO95785 1651 aa24.67■■□□□ 1.54
AC009542.1-201ENST00000412549 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
AC009542.1-201ENST00000412549 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
AC009542.1-201ENST00000412549 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
AC009542.1-201ENST00000412549 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
AC009542.1-201ENST00000412549 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
AC009542.1-201ENST00000412549 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
AC009542.1-201ENST00000412549 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
AC009542.1-201ENST00000412549 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
AC009542.1-201ENST00000412549 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
AC009542.1-201ENST00000412549 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
AC009542.1-201ENST00000412549 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
AC009542.1-201ENST00000412549 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
AC009542.1-201ENST00000412549 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
AC009542.1-201ENST00000412549 CFTRP13569 1480 aa23.58■■□□□ 1.37
AC009542.1-201ENST00000412549 PRDM2Q13029 1718 aa23.57■■□□□ 1.36
AC009542.1-201ENST00000412549 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
AC009542.1-201ENST00000412549 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
AC009542.1-201ENST00000412549 NESP48681 1621 aa23.47■■□□□ 1.35
AC009542.1-201ENST00000412549 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
AC009542.1-201ENST00000412549 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
AC009542.1-201ENST00000412549 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
AC009542.1-201ENST00000412549 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
AC009542.1-201ENST00000412549 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
AC009542.1-201ENST00000412549 CUX1P39880 1505 aa23.24■■□□□ 1.31
AC009542.1-201ENST00000412549 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
AC009542.1-201ENST00000412549 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
AC009542.1-201ENST00000412549 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
AC009542.1-201ENST00000412549 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
AC009542.1-201ENST00000412549 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
AC009542.1-201ENST00000412549 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
AC009542.1-201ENST00000412549 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
AC009542.1-201ENST00000412549 SOGA1O94964 1423 aa23.05■■□□□ 1.28
AC009542.1-201ENST00000412549 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
AC009542.1-201ENST00000412549 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
AC009542.1-201ENST00000412549 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
AC009542.1-201ENST00000412549 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
AC009542.1-201ENST00000412549 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
AC009542.1-201ENST00000412549 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
AC009542.1-201ENST00000412549 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
AC009542.1-201ENST00000412549 EEA1Q15075 1411 aa22.88■■□□□ 1.25
AC009542.1-201ENST00000412549 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
AC009542.1-201ENST00000412549 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
AC009542.1-201ENST00000412549 WDR62O43379 1518 aa22.84■■□□□ 1.25
AC009542.1-201ENST00000412549 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
AC009542.1-201ENST00000412549 CUX2O14529 1486 aa22.8■■□□□ 1.24
AC009542.1-201ENST00000412549 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
AC009542.1-201ENST00000412549 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
AC009542.1-201ENST00000412549 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
AC009542.1-201ENST00000412549 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
AC009542.1-201ENST00000412549 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
AC009542.1-201ENST00000412549 KIF21BO75037 1637 aa22.68■■□□□ 1.22
AC009542.1-201ENST00000412549 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
AC009542.1-201ENST00000412549 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
AC009542.1-201ENST00000412549 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
AC009542.1-201ENST00000412549 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
AC009542.1-201ENST00000412549 IGF1RP08069 1367 aa22.6■■□□□ 1.21
AC009542.1-201ENST00000412549 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
AC009542.1-201ENST00000412549 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
AC009542.1-201ENST00000412549 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
AC009542.1-201ENST00000412549 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
AC009542.1-201ENST00000412549 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
AC009542.1-201ENST00000412549 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.2
AC009542.1-201ENST00000412549 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
AC009542.1-201ENST00000412549 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
AC009542.1-201ENST00000412549 CUL7Q14999 1698 aa22.5■■□□□ 1.19
AC009542.1-201ENST00000412549 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
AC009542.1-201ENST00000412549 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
AC009542.1-201ENST00000412549 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
AC009542.1-201ENST00000412549 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
AC009542.1-201ENST00000412549 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
AC009542.1-201ENST00000412549 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
AC009542.1-201ENST00000412549 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
AC009542.1-201ENST00000412549 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
AC009542.1-201ENST00000412549 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
AC009542.1-201ENST00000412549 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
AC009542.1-201ENST00000412549 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
AC009542.1-201ENST00000412549 CLIP1P30622 1438 aa22.24■■□□□ 1.15
AC009542.1-201ENST00000412549 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
AC009542.1-201ENST00000412549 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms