RNA–Protein interactions for RNA: ENST00000412532.6

SLC1A5-201, Transcript of solute carrier family 1 member 5, humanhuman

TSL 2 BASIC

Gene SLC1A5, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A5-201ENST00000412532 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.542e-22■■■■■ 79.1
SLC1A5-201ENST00000412532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.199e-7■■■■■ 67.3
SLC1A5-201ENST00000412532 AKAP1Q92667 903 aaKnown RBP eCLIP13□□□□□ -0.337e-11■■■■■ 58.6
SLC1A5-201ENST00000412532 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.52e-10■■■■■ 54.5
SLC1A5-201ENST00000412532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.13e-9■■■■■ 46
SLC1A5-201ENST00000412532 RBM15Q96T37 977 aaKnown RBP eCLIP15.36■□□□□ 0.052e-8■■■■■ 43.9
SLC1A5-201ENST00000412532 EFTUD2Q15029 972 aaKnown RBP eCLIP15.2■□□□□ 0.029e-11■■■■■ 40.5
SLC1A5-201ENST00000412532 SF3A3Q12874 501 aaKnown RBP eCLIP14.75□□□□□ -0.055e-6■■■■■ 39.5
SLC1A5-201ENST00000412532 RBM22Q9NW64 420 aaKnown RBP eCLIP15.36■□□□□ 0.058e-9■■■■■ 36.9
SLC1A5-201ENST00000412532 GTF2F1P35269 517 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■■■ 36.2
SLC1A5-201ENST00000412532 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.211e-7■■■■■ 34.1
SLC1A5-201ENST00000412532 TARDBPQ13148 414 aaKnown RBP eCLIP13.97□□□□□ -0.171e-23■■■■■ 34
SLC1A5-201ENST00000412532 DKC1O60832 514 aaKnown RBP eCLIP16.73■□□□□ 0.271e-33■■■■■ 32.1
SLC1A5-201ENST00000412532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■■■■ 29.5
SLC1A5-201ENST00000412532 RPS3P23396 243 aaKnown RBP eCLIP14.93□□□□□ -0.021e-12■■■■■ 28.9
SLC1A5-201ENST00000412532 EWSR1Q01844 656 aaKnown RBP eCLIP12.02□□□□□ -0.482e-6■■■■■ 28.4
SLC1A5-201ENST00000412532 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.228e-8■■■■■ 27.2
SLC1A5-201ENST00000412532 HNRNPKP61978 463 aaKnown RBP eCLIP14.52□□□□□ -0.082e-8■■■■□ 26.3
SLC1A5-201ENST00000412532 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.075e-22■■■■□ 26.3
SLC1A5-201ENST00000412532 TIA1P31483 386 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■■■■□ 25.1
SLC1A5-201ENST00000412532 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.141e-9■■■■□ 23.9
SLC1A5-201ENST00000412532 SF3B1O75533 1304 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■■□ 23.3
SLC1A5-201ENST00000412532 PCBP2Q15366 365 aaKnown RBP eCLIP14.72□□□□□ -0.051e-9■■■■□ 23.3
SLC1A5-201ENST00000412532 SF3B4Q15427 424 aaKnown RBP eCLIP13.23□□□□□ -0.297e-8■■■■□ 23.1
SLC1A5-201ENST00000412532 PRPF4O43172 522 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■□ 22.8
SLC1A5-201ENST00000412532 SND1Q7KZF4 910 aaKnown RBP eCLIP15.62■□□□□ 0.091e-17■■■■□ 22.5
SLC1A5-201ENST00000412532 PTBP1P26599 531 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■■■□ 22.5
SLC1A5-201ENST00000412532 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.379e-7■■■■□ 22.1
SLC1A5-201ENST00000412532 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.468e-6■■■■□ 21.3
SLC1A5-201ENST00000412532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.55□□□□□ -0.241e-8■■■■□ 20.8
SLC1A5-201ENST00000412532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.8■□□□□ 0.448e-6■■■□□ 18.6
SLC1A5-201ENST00000412532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.38□□□□□ -0.119e-6■■■□□ 17.3
SLC1A5-201ENST00000412532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.03■□□□□ 0.161e-10■■■□□ 17.1
SLC1A5-201ENST00000412532 YBX3P16989 372 aaKnown RBP eCLIP17.78■□□□□ 0.441e-8■■■□□ 16.7
SLC1A5-201ENST00000412532 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.331e-12■■■□□ 16.5
SLC1A5-201ENST00000412532 NIP7Q9Y221 180 aaKnown RBP eCLIP18.69■□□□□ 0.583e-8■■□□□ 14.3
SLC1A5-201ENST00000412532 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.372e-7■■□□□ 14.2
SLC1A5-201ENST00000412532 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.214e-7■■□□□ 14
SLC1A5-201ENST00000412532 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.48□□□□□ -0.255e-7■■□□□ 14
SLC1A5-201ENST00000412532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.45□□□□□ -0.13e-6■■□□□ 13.6
SLC1A5-201ENST00000412532 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.132e-9■■□□□ 13.6
SLC1A5-201ENST00000412532 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 14e-26■■□□□ 13.5
SLC1A5-201ENST00000412532 HNRNPLP14866 589 aaKnown RBP eCLIP15.1■□□□□ 0.016e-13■■□□□ 13.5
SLC1A5-201ENST00000412532 RPS11P62280 158 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■■□□□ 13.2
SLC1A5-201ENST00000412532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.461e-10■■□□□ 13.1
SLC1A5-201ENST00000412532 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.416e-8■■□□□ 13
SLC1A5-201ENST00000412532 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.459e-7■■□□□ 11.6
SLC1A5-201ENST00000412532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.372e-12■■□□□ 11.4
SLC1A5-201ENST00000412532 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.62□□□□□ -0.076e-7■□□□□ 11.1
SLC1A5-201ENST00000412532 ILF3Q12906 894 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■□□□□ 11
SLC1A5-201ENST00000412532 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.28■□□□□ 0.041e-7■□□□□ 10.9
SLC1A5-201ENST00000412532 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.177e-8■□□□□ 10.6
SLC1A5-201ENST00000412532 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.41e-13■□□□□ 10.1
SLC1A5-201ENST00000412532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■□□□□ 9.9
SLC1A5-201ENST00000412532 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■□□□□ 9.6
SLC1A5-201ENST00000412532 NOLC1Q14978 699 aaKnown RBP eCLIP16.37■□□□□ 0.219e-6■□□□□ 9.6
SLC1A5-201ENST00000412532 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.647e-6■□□□□ 9.3
SLC1A5-201ENST00000412532 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.68■□□□□ 0.13e-10■□□□□ 9.1
SLC1A5-201ENST00000412532 LARP4Q71RC2 724 aaKnown RBP eCLIP14.59□□□□□ -0.071e-20■□□□□ 9
SLC1A5-201ENST00000412532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.221e-14■□□□□ 8.6
SLC1A5-201ENST00000412532 SRSF7Q16629 238 aaKnown RBP eCLIP12.61□□□□□ -0.398e-34■□□□□ 8.1
Retrieved 61 of 61 RNA–protein pairs in 664.3 ms