RNA–Protein interactions for RNA: ENST00000411892.5

RANBP1-203, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-203ENST00000411892 EIF4G2P78344 907 aaKnown RBP eCLIP20.81■□□□□ 0.922e-20■■■■■ 114.8
RANBP1-203ENST00000411892 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.77□□□□□ -0.218e-11■■■■■ 103.1
RANBP1-203ENST00000411892 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.194e-11■■■■■ 88.5
RANBP1-203ENST00000411892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.062e-10■■■■■ 75.6
RANBP1-203ENST00000411892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.85■□□□□ 0.134e-16■■■■■ 72.4
RANBP1-203ENST00000411892 EWSR1Q01844 656 aaKnown RBP eCLIP10.93□□□□□ -0.664e-22■■■■■ 70.4
RANBP1-203ENST00000411892 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■■■ 67.5
RANBP1-203ENST00000411892 SF3B4Q15427 424 aaKnown RBP eCLIP13.38□□□□□ -0.271e-19■■■■■ 52.3
RANBP1-203ENST00000411892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■■■ 51.4
RANBP1-203ENST00000411892 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.839e-11■■■■■ 44.3
RANBP1-203ENST00000411892 EFTUD2Q15029 972 aaKnown RBP eCLIP14.3□□□□□ -0.121e-9■■■■■ 43.3
RANBP1-203ENST00000411892 TARDBPQ13148 414 aaKnown RBP eCLIP14.6□□□□□ -0.078e-7■■■■■ 40
RANBP1-203ENST00000411892 PCBP2Q15366 365 aaKnown RBP eCLIP14.08□□□□□ -0.167e-7■■■■■ 36.9
RANBP1-203ENST00000411892 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.54□□□□□ -0.081e-10■■■■■ 35.3
RANBP1-203ENST00000411892 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.673e-6■■■■■ 34.3
RANBP1-203ENST00000411892 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■■■ 34.3
RANBP1-203ENST00000411892 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.31■□□□□ 0.369e-9■■■■■ 32.4
RANBP1-203ENST00000411892 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.481e-45■■■■■ 31.9
RANBP1-203ENST00000411892 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.189e-9■■■■■ 29.2
RANBP1-203ENST00000411892 DDX3XO00571 662 aaKnown RBP eCLIP15.4■□□□□ 0.062e-41■■■■■ 28.1
RANBP1-203ENST00000411892 AKAP1Q92667 903 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■■■■ 27.8
RANBP1-203ENST00000411892 SF3B1O75533 1304 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■■■ 27.7
RANBP1-203ENST00000411892 RBM22Q9NW64 420 aaKnown RBP eCLIP14.96□□□□□ -0.013e-9■■■■■ 26.8
RANBP1-203ENST00000411892 RBFOX2O43251 390 aaKnown RBP eCLIP11.57□□□□□ -0.561e-8■■■■□ 26.1
RANBP1-203ENST00000411892 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.165e-7■■■■□ 26.1
RANBP1-203ENST00000411892 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.293e-10■■■■□ 25.3
RANBP1-203ENST00000411892 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.262e-8■■■■□ 25.3
RANBP1-203ENST00000411892 AQRO60306 1485 aaKnown RBP eCLIP25.94■■□□□ 1.742e-8■■■■□ 25.1
RANBP1-203ENST00000411892 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.175e-7■■■■□ 24.8
RANBP1-203ENST00000411892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.43e-8■■■■□ 24
RANBP1-203ENST00000411892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.4■□□□□ 0.382e-7■■■■□ 23.8
RANBP1-203ENST00000411892 ZRANB2O95218 330 aaKnown RBP eCLIP15□□□□□ -0.014e-7■■■■□ 23.4
RANBP1-203ENST00000411892 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.272e-10■■■■□ 23.2
RANBP1-203ENST00000411892 CDC40O60508 579 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■■□ 23.1
RANBP1-203ENST00000411892 NCBP2P52298 156 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■■□ 22.6
RANBP1-203ENST00000411892 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.761e-6■■■■□ 22.5
RANBP1-203ENST00000411892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.08■□□□□ 0.169e-8■■■■□ 22.2
RANBP1-203ENST00000411892 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■■□ 21.3
RANBP1-203ENST00000411892 EIF3GO75821 320 aaKnown RBP eCLIP10.7□□□□□ -0.76e-8■■■■□ 20.9
RANBP1-203ENST00000411892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.24e-9■■■■□ 20.2
RANBP1-203ENST00000411892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.87■■□□□ 1.251e-9■■■■□ 20.2
RANBP1-203ENST00000411892 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.016e-9■■■■□ 19.7
RANBP1-203ENST00000411892 NONOQ15233 471 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■■■■□ 19.5
RANBP1-203ENST00000411892 DDX42Q86XP3 938 aaKnown RBP eCLIP15.58■□□□□ 0.086e-7■■■□□ 19.2
RANBP1-203ENST00000411892 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.15■□□□□ 0.023e-6■■■□□ 18.8
RANBP1-203ENST00000411892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.428e-11■■■□□ 18.5
RANBP1-203ENST00000411892 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.323e-11■■■□□ 18.5
RANBP1-203ENST00000411892 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■■□□ 18
RANBP1-203ENST00000411892 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.23e-9■■■□□ 16.7
RANBP1-203ENST00000411892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.423e-7■■■□□ 16.2
RANBP1-203ENST00000411892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.252e-8■■■□□ 15.6
RANBP1-203ENST00000411892 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.16□□□□□ -0.141e-7■■■□□ 14.9
RANBP1-203ENST00000411892 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.323e-7■■■□□ 14.8
RANBP1-203ENST00000411892 KHSRPQ92945 711 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■■□□□ 14.2
RANBP1-203ENST00000411892 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.118e-7■■□□□ 13.3
RANBP1-203ENST00000411892 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.56□□□□□ -0.242e-11■■□□□ 13
RANBP1-203ENST00000411892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.38■□□□□ 0.051e-18■■□□□ 12.3
RANBP1-203ENST00000411892 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.072e-8■■□□□ 12.2
RANBP1-203ENST00000411892 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.37■□□□□ 0.059e-7■■□□□ 12
RANBP1-203ENST00000411892 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.113e-6■■□□□ 12
RANBP1-203ENST00000411892 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■□□□ 12
RANBP1-203ENST00000411892 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.192e-8■■□□□ 11.9
RANBP1-203ENST00000411892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.41■□□□□ 0.061e-10■■□□□ 11.5
RANBP1-203ENST00000411892 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.335e-6■■□□□ 11.4
RANBP1-203ENST00000411892 CPSF6Q16630 551 aaKnown RBP eCLIP13.99□□□□□ -0.173e-7■□□□□ 11.2
RANBP1-203ENST00000411892 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.89□□□□□ -0.516e-9■□□□□ 11.2
RANBP1-203ENST00000411892 RPS3P23396 243 aaKnown RBP eCLIP14.5□□□□□ -0.092e-29■□□□□ 11.1
RANBP1-203ENST00000411892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■□□□□ 10.7
RANBP1-203ENST00000411892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.89e-11■□□□□ 10.7
RANBP1-203ENST00000411892 PUM1Q14671 1186 aaKnown RBP eCLIP14.95□□□□□ -0.022e-10■□□□□ 10.6
RANBP1-203ENST00000411892 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■□□□□ 10.5
RANBP1-203ENST00000411892 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.181e-8■□□□□ 10.3
RANBP1-203ENST00000411892 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■□□□□ 10
RANBP1-203ENST00000411892 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.23e-6■□□□□ 9.8
RANBP1-203ENST00000411892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.049e-7■□□□□ 9.7
RANBP1-203ENST00000411892 LARP4Q71RC2 724 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■□□□□ 9.5
RANBP1-203ENST00000411892 PABPC4Q13310 644 aaKnown RBP eCLIP17.64■□□□□ 0.414e-38■□□□□ 9.5
RANBP1-203ENST00000411892 YBX3P16989 372 aaKnown RBP eCLIP19.2■□□□□ 0.662e-33■□□□□ 9.3
RANBP1-203ENST00000411892 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.241e-10■□□□□ 8.7
RANBP1-203ENST00000411892 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.638e-8■□□□□ 8.1
Retrieved 80 of 80 RNA–protein pairs in 10.2 ms