RNA–Protein interactions for RNA: ENST00000411649.3

NELFA-204, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-204ENST00000411649 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
NELFA-204ENST00000411649 ABCC9O60706 1549 aa27.28■■□□□ 1.96
NELFA-204ENST00000411649 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
NELFA-204ENST00000411649 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
NELFA-204ENST00000411649 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
NELFA-204ENST00000411649 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
NELFA-204ENST00000411649 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
NELFA-204ENST00000411649 NACADO15069 1562 aa25.29■■□□□ 1.64
NELFA-204ENST00000411649 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
NELFA-204ENST00000411649 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
NELFA-204ENST00000411649 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
NELFA-204ENST00000411649 CECR2Q9BXF3 1484 aa24.56■■□□□ 1.52
NELFA-204ENST00000411649 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
NELFA-204ENST00000411649 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
NELFA-204ENST00000411649 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
NELFA-204ENST00000411649 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
NELFA-204ENST00000411649 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
NELFA-204ENST00000411649 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
NELFA-204ENST00000411649 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
NELFA-204ENST00000411649 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
NELFA-204ENST00000411649 CUX2O14529 1486 aa23.51■■□□□ 1.35
NELFA-204ENST00000411649 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
NELFA-204ENST00000411649 NESP48681 1621 aa23.33■■□□□ 1.32
NELFA-204ENST00000411649 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
NELFA-204ENST00000411649 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
NELFA-204ENST00000411649 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
NELFA-204ENST00000411649 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
NELFA-204ENST00000411649 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
NELFA-204ENST00000411649 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
NELFA-204ENST00000411649 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
NELFA-204ENST00000411649 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
NELFA-204ENST00000411649 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
NELFA-204ENST00000411649 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
NELFA-204ENST00000411649 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
NELFA-204ENST00000411649 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
NELFA-204ENST00000411649 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
NELFA-204ENST00000411649 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
NELFA-204ENST00000411649 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
NELFA-204ENST00000411649 WDR62O43379 1518 aa22.6■■□□□ 1.21
NELFA-204ENST00000411649 WIZO95785 1651 aa22.56■■□□□ 1.2
NELFA-204ENST00000411649 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
NELFA-204ENST00000411649 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
NELFA-204ENST00000411649 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
NELFA-204ENST00000411649 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
NELFA-204ENST00000411649 CFTRP13569 1480 aa22.34■■□□□ 1.17
NELFA-204ENST00000411649 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
NELFA-204ENST00000411649 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
NELFA-204ENST00000411649 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
NELFA-204ENST00000411649 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
NELFA-204ENST00000411649 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
NELFA-204ENST00000411649 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
NELFA-204ENST00000411649 CYB5RLQ6IPT4 315 aa22.1■■□□□ 1.13
NELFA-204ENST00000411649 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
NELFA-204ENST00000411649 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
NELFA-204ENST00000411649 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
NELFA-204ENST00000411649 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
NELFA-204ENST00000411649 TOPBP1Q92547 1522 aa22■■□□□ 1.11
NELFA-204ENST00000411649 FBLN2P98095 1184 aa21.96■■□□□ 1.11
NELFA-204ENST00000411649 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
NELFA-204ENST00000411649 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.15e-7■■■■□ 22.5
NELFA-204ENST00000411649 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
NELFA-204ENST00000411649 ARAP1Q96P48 1450 aa21.88■■□□□ 1.09
NELFA-204ENST00000411649 CHD1O14646 1710 aa21.86■■□□□ 1.09
NELFA-204ENST00000411649 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
NELFA-204ENST00000411649 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
NELFA-204ENST00000411649 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
NELFA-204ENST00000411649 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
NELFA-204ENST00000411649 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
NELFA-204ENST00000411649 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
NELFA-204ENST00000411649 SOGA1O94964 1423 aa21.67■■□□□ 1.06
NELFA-204ENST00000411649 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
NELFA-204ENST00000411649 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
NELFA-204ENST00000411649 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
NELFA-204ENST00000411649 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
NELFA-204ENST00000411649 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
NELFA-204ENST00000411649 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
NELFA-204ENST00000411649 CUX1P39880 1505 aa21.49■■□□□ 1.03
NELFA-204ENST00000411649 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
NELFA-204ENST00000411649 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
NELFA-204ENST00000411649 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
NELFA-204ENST00000411649 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
NELFA-204ENST00000411649 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
NELFA-204ENST00000411649 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
NELFA-204ENST00000411649 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
NELFA-204ENST00000411649 PBRM1Q86U86 1689 aa21.33■■□□□ 1
NELFA-204ENST00000411649 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
NELFA-204ENST00000411649 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
NELFA-204ENST00000411649 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
NELFA-204ENST00000411649 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
NELFA-204ENST00000411649 NUP160Q12769 1436 aa21.13■□□□□ 0.97
NELFA-204ENST00000411649 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
NELFA-204ENST00000411649 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
NELFA-204ENST00000411649 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
NELFA-204ENST00000411649 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
NELFA-204ENST00000411649 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
NELFA-204ENST00000411649 SHROOM2Q13796 1616 aa21.04■□□□□ 0.96
NELFA-204ENST00000411649 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
NELFA-204ENST00000411649 JPH4Q96JJ6 628 aa21.01■□□□□ 0.95
NELFA-204ENST00000411649 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
NELFA-204ENST00000411649 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms