RNA–Protein interactions for RNA: ENST00000411436.1

AC009965.1-201, humanhuman

TSL 4 BASIC

Gene AC009965.1, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009965.1-201ENST00000411436 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
AC009965.1-201ENST00000411436 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
AC009965.1-201ENST00000411436 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
AC009965.1-201ENST00000411436 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
AC009965.1-201ENST00000411436 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
AC009965.1-201ENST00000411436 FOXD1Q16676 465 aa17.63■□□□□ 0.41
AC009965.1-201ENST00000411436 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
AC009965.1-201ENST00000411436 ADRA2BP18089 450 aa16.99■□□□□ 0.31
AC009965.1-201ENST00000411436 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
AC009965.1-201ENST00000411436 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
AC009965.1-201ENST00000411436 MSH5O43196 834 aa16.18■□□□□ 0.18
AC009965.1-201ENST00000411436 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
AC009965.1-201ENST00000411436 KCNA4P22459 653 aa15.5■□□□□ 0.07
AC009965.1-201ENST00000411436 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
AC009965.1-201ENST00000411436 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
AC009965.1-201ENST00000411436 ABCC9O60706 1549 aa15.39■□□□□ 0.05
AC009965.1-201ENST00000411436 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
AC009965.1-201ENST00000411436 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
AC009965.1-201ENST00000411436 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
AC009965.1-201ENST00000411436 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
AC009965.1-201ENST00000411436 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
AC009965.1-201ENST00000411436 POTEDQ86YR6 584 aa15.03■□□□□ -0
AC009965.1-201ENST00000411436 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
AC009965.1-201ENST00000411436 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
AC009965.1-201ENST00000411436 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
AC009965.1-201ENST00000411436 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
AC009965.1-201ENST00000411436 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
AC009965.1-201ENST00000411436 NACADO15069 1562 aa14.42□□□□□ -0.1
AC009965.1-201ENST00000411436 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
AC009965.1-201ENST00000411436 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
AC009965.1-201ENST00000411436 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
AC009965.1-201ENST00000411436 ZBTB22O15209 634 aa14.32□□□□□ -0.12
AC009965.1-201ENST00000411436 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
AC009965.1-201ENST00000411436 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
AC009965.1-201ENST00000411436 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
AC009965.1-201ENST00000411436 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
AC009965.1-201ENST00000411436 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
AC009965.1-201ENST00000411436 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
AC009965.1-201ENST00000411436 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
AC009965.1-201ENST00000411436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
AC009965.1-201ENST00000411436 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
AC009965.1-201ENST00000411436 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
AC009965.1-201ENST00000411436 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
AC009965.1-201ENST00000411436 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
AC009965.1-201ENST00000411436 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
AC009965.1-201ENST00000411436 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
AC009965.1-201ENST00000411436 CECR2Q9BXF3 1484 aa13.9□□□□□ -0.18
AC009965.1-201ENST00000411436 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
AC009965.1-201ENST00000411436 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
AC009965.1-201ENST00000411436 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
AC009965.1-201ENST00000411436 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
AC009965.1-201ENST00000411436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
AC009965.1-201ENST00000411436 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
AC009965.1-201ENST00000411436 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
AC009965.1-201ENST00000411436 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
AC009965.1-201ENST00000411436 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
AC009965.1-201ENST00000411436 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
AC009965.1-201ENST00000411436 APLP2Q06481 763 aa13.57□□□□□ -0.24
AC009965.1-201ENST00000411436 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
AC009965.1-201ENST00000411436 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
AC009965.1-201ENST00000411436 CAPN15O75808 1086 aa13.38□□□□□ -0.27
AC009965.1-201ENST00000411436 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
AC009965.1-201ENST00000411436 CUX2O14529 1486 aa13.36□□□□□ -0.27
AC009965.1-201ENST00000411436 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
AC009965.1-201ENST00000411436 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
AC009965.1-201ENST00000411436 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
AC009965.1-201ENST00000411436 DSG3P32926 999 aa13.27□□□□□ -0.29
AC009965.1-201ENST00000411436 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
AC009965.1-201ENST00000411436 POLA2Q14181 598 aa13.22□□□□□ -0.29
AC009965.1-201ENST00000411436 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
AC009965.1-201ENST00000411436 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
AC009965.1-201ENST00000411436 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
AC009965.1-201ENST00000411436 NESP48681 1621 aa13.17□□□□□ -0.3
AC009965.1-201ENST00000411436 ABCB7O75027 752 aa13.15□□□□□ -0.3
AC009965.1-201ENST00000411436 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
AC009965.1-201ENST00000411436 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
AC009965.1-201ENST00000411436 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
AC009965.1-201ENST00000411436 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
AC009965.1-201ENST00000411436 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
AC009965.1-201ENST00000411436 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
AC009965.1-201ENST00000411436 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
AC009965.1-201ENST00000411436 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
AC009965.1-201ENST00000411436 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
AC009965.1-201ENST00000411436 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.34
AC009965.1-201ENST00000411436 FBLN2P98095 1184 aa12.94□□□□□ -0.34
AC009965.1-201ENST00000411436 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
AC009965.1-201ENST00000411436 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
AC009965.1-201ENST00000411436 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
AC009965.1-201ENST00000411436 WDR62O43379 1518 aa12.86□□□□□ -0.35
AC009965.1-201ENST00000411436 FKBP8Q14318 412 aa12.8□□□□□ -0.36
AC009965.1-201ENST00000411436 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
AC009965.1-201ENST00000411436 WIZO95785 1651 aa12.79□□□□□ -0.36
AC009965.1-201ENST00000411436 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
AC009965.1-201ENST00000411436 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
AC009965.1-201ENST00000411436 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
AC009965.1-201ENST00000411436 CFTRP13569 1480 aa12.72□□□□□ -0.37
AC009965.1-201ENST00000411436 PROM2Q8N271 834 aa12.7□□□□□ -0.38
AC009965.1-201ENST00000411436 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
AC009965.1-201ENST00000411436 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
AC009965.1-201ENST00000411436 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms