RNA–Protein interactions for RNA: ENST00000410443.1

RN7SKP127-201, Transcript of RNA, 7SK small nuclear pseudogene 127, humanhuman

BASIC

Gene RN7SKP127, Length 354 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP127-201ENST00000410443 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
RN7SKP127-201ENST00000410443 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
RN7SKP127-201ENST00000410443 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
RN7SKP127-201ENST00000410443 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
RN7SKP127-201ENST00000410443 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
RN7SKP127-201ENST00000410443 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
RN7SKP127-201ENST00000410443 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
RN7SKP127-201ENST00000410443 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
RN7SKP127-201ENST00000410443 FOXD1Q16676 465 aa15.38■□□□□ 0.05
RN7SKP127-201ENST00000410443 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
RN7SKP127-201ENST00000410443 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
RN7SKP127-201ENST00000410443 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
RN7SKP127-201ENST00000410443 NACADO15069 1562 aa15.11■□□□□ 0.01
RN7SKP127-201ENST00000410443 ABCC9O60706 1549 aa15.09■□□□□ 0.01
RN7SKP127-201ENST00000410443 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
RN7SKP127-201ENST00000410443 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
RN7SKP127-201ENST00000410443 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.05
RN7SKP127-201ENST00000410443 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
RN7SKP127-201ENST00000410443 MSH5O43196 834 aa14.65□□□□□ -0.06
RN7SKP127-201ENST00000410443 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
RN7SKP127-201ENST00000410443 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP127-201ENST00000410443 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
RN7SKP127-201ENST00000410443 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
RN7SKP127-201ENST00000410443 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
RN7SKP127-201ENST00000410443 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
RN7SKP127-201ENST00000410443 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
RN7SKP127-201ENST00000410443 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP127-201ENST00000410443 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
RN7SKP127-201ENST00000410443 WIZO95785 1651 aa14.24□□□□□ -0.13
RN7SKP127-201ENST00000410443 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
RN7SKP127-201ENST00000410443 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
RN7SKP127-201ENST00000410443 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
RN7SKP127-201ENST00000410443 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
RN7SKP127-201ENST00000410443 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
RN7SKP127-201ENST00000410443 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
RN7SKP127-201ENST00000410443 ADRA2BP18089 450 aa14.02□□□□□ -0.17
RN7SKP127-201ENST00000410443 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
RN7SKP127-201ENST00000410443 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
RN7SKP127-201ENST00000410443 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
RN7SKP127-201ENST00000410443 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
RN7SKP127-201ENST00000410443 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
RN7SKP127-201ENST00000410443 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
RN7SKP127-201ENST00000410443 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
RN7SKP127-201ENST00000410443 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
RN7SKP127-201ENST00000410443 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
RN7SKP127-201ENST00000410443 CFTRP13569 1480 aa13.65□□□□□ -0.22
RN7SKP127-201ENST00000410443 EEA1Q15075 1411 aa13.64□□□□□ -0.23
RN7SKP127-201ENST00000410443 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
RN7SKP127-201ENST00000410443 PRDM2Q13029 1718 aa13.57□□□□□ -0.24
RN7SKP127-201ENST00000410443 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
RN7SKP127-201ENST00000410443 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
RN7SKP127-201ENST00000410443 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
RN7SKP127-201ENST00000410443 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP127-201ENST00000410443 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
RN7SKP127-201ENST00000410443 SOGA1O94964 1423 aa13.48□□□□□ -0.25
RN7SKP127-201ENST00000410443 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
RN7SKP127-201ENST00000410443 CUX1P39880 1505 aa13.44□□□□□ -0.26
RN7SKP127-201ENST00000410443 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
RN7SKP127-201ENST00000410443 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 KIF21BO75037 1637 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
RN7SKP127-201ENST00000410443 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
RN7SKP127-201ENST00000410443 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
RN7SKP127-201ENST00000410443 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
RN7SKP127-201ENST00000410443 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
RN7SKP127-201ENST00000410443 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
RN7SKP127-201ENST00000410443 NESP48681 1621 aa13.28□□□□□ -0.28
RN7SKP127-201ENST00000410443 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
RN7SKP127-201ENST00000410443 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
RN7SKP127-201ENST00000410443 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
RN7SKP127-201ENST00000410443 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
RN7SKP127-201ENST00000410443 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
RN7SKP127-201ENST00000410443 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
RN7SKP127-201ENST00000410443 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
RN7SKP127-201ENST00000410443 CUX2O14529 1486 aa13.21□□□□□ -0.3
RN7SKP127-201ENST00000410443 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP127-201ENST00000410443 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
RN7SKP127-201ENST00000410443 IGF1RP08069 1367 aa13.18□□□□□ -0.3
RN7SKP127-201ENST00000410443 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
RN7SKP127-201ENST00000410443 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
RN7SKP127-201ENST00000410443 CLIP1P30622 1438 aa13.15□□□□□ -0.3
RN7SKP127-201ENST00000410443 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
RN7SKP127-201ENST00000410443 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
RN7SKP127-201ENST00000410443 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
RN7SKP127-201ENST00000410443 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
RN7SKP127-201ENST00000410443 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
RN7SKP127-201ENST00000410443 CUL7Q14999 1698 aa13.09□□□□□ -0.31
RN7SKP127-201ENST00000410443 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
RN7SKP127-201ENST00000410443 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
RN7SKP127-201ENST00000410443 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
RN7SKP127-201ENST00000410443 WDR62O43379 1518 aa13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
RN7SKP127-201ENST00000410443 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
RN7SKP127-201ENST00000410443 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
RN7SKP127-201ENST00000410443 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms