RNA–Protein interactions for RNA: ENST00000410175.1

RN7SKP117-201, Transcript of RNA, 7SK small nuclear pseudogene 117, humanhuman

BASIC

Gene RN7SKP117, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP117-201ENST00000410175 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
RN7SKP117-201ENST00000410175 ABCC9O60706 1549 aa17.34■□□□□ 0.37
RN7SKP117-201ENST00000410175 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
RN7SKP117-201ENST00000410175 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
RN7SKP117-201ENST00000410175 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
RN7SKP117-201ENST00000410175 NACADO15069 1562 aa16.24■□□□□ 0.19
RN7SKP117-201ENST00000410175 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
RN7SKP117-201ENST00000410175 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
RN7SKP117-201ENST00000410175 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
RN7SKP117-201ENST00000410175 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
RN7SKP117-201ENST00000410175 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
RN7SKP117-201ENST00000410175 SHROOM4Q9ULL8 1493 aa15.79■□□□□ 0.12
RN7SKP117-201ENST00000410175 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
RN7SKP117-201ENST00000410175 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
RN7SKP117-201ENST00000410175 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
RN7SKP117-201ENST00000410175 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
RN7SKP117-201ENST00000410175 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
RN7SKP117-201ENST00000410175 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
RN7SKP117-201ENST00000410175 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
RN7SKP117-201ENST00000410175 CUX2O14529 1486 aa15.18■□□□□ 0.02
RN7SKP117-201ENST00000410175 ERCC6Q03468 1493 aa15.03■□□□□ -0
RN7SKP117-201ENST00000410175 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
RN7SKP117-201ENST00000410175 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
RN7SKP117-201ENST00000410175 HMGXB3Q12766 1538 aa14.85□□□□□ -0.03
RN7SKP117-201ENST00000410175 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
RN7SKP117-201ENST00000410175 NESP48681 1621 aa14.78□□□□□ -0.04
RN7SKP117-201ENST00000410175 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
RN7SKP117-201ENST00000410175 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
RN7SKP117-201ENST00000410175 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
RN7SKP117-201ENST00000410175 LAMC3Q9Y6N6 1575 aa14.7□□□□□ -0.06
RN7SKP117-201ENST00000410175 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
RN7SKP117-201ENST00000410175 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP117-201ENST00000410175 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
RN7SKP117-201ENST00000410175 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
RN7SKP117-201ENST00000410175 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
RN7SKP117-201ENST00000410175 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
RN7SKP117-201ENST00000410175 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RN7SKP117-201ENST00000410175 WDR62O43379 1518 aa14.5□□□□□ -0.09
RN7SKP117-201ENST00000410175 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
RN7SKP117-201ENST00000410175 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
RN7SKP117-201ENST00000410175 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
RN7SKP117-201ENST00000410175 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
RN7SKP117-201ENST00000410175 CFTRP13569 1480 aa14.28□□□□□ -0.12
RN7SKP117-201ENST00000410175 WIZO95785 1651 aa14.24□□□□□ -0.13
RN7SKP117-201ENST00000410175 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
RN7SKP117-201ENST00000410175 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
RN7SKP117-201ENST00000410175 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
RN7SKP117-201ENST00000410175 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
RN7SKP117-201ENST00000410175 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
RN7SKP117-201ENST00000410175 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
RN7SKP117-201ENST00000410175 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
RN7SKP117-201ENST00000410175 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
RN7SKP117-201ENST00000410175 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
RN7SKP117-201ENST00000410175 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
RN7SKP117-201ENST00000410175 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
RN7SKP117-201ENST00000410175 ABCC8Q09428 1581 aa14.03□□□□□ -0.16
RN7SKP117-201ENST00000410175 TOPBP1Q92547 1522 aa14.01□□□□□ -0.17
RN7SKP117-201ENST00000410175 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
RN7SKP117-201ENST00000410175 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
RN7SKP117-201ENST00000410175 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
RN7SKP117-201ENST00000410175 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
RN7SKP117-201ENST00000410175 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
RN7SKP117-201ENST00000410175 CHD1O14646 1710 aa13.92□□□□□ -0.18
RN7SKP117-201ENST00000410175 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.18
RN7SKP117-201ENST00000410175 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
RN7SKP117-201ENST00000410175 FBLN2P98095 1184 aa13.88□□□□□ -0.19
RN7SKP117-201ENST00000410175 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
RN7SKP117-201ENST00000410175 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
RN7SKP117-201ENST00000410175 CLASP1Q7Z460 1538 aa13.81□□□□□ -0.2
RN7SKP117-201ENST00000410175 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
RN7SKP117-201ENST00000410175 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
RN7SKP117-201ENST00000410175 SOGA1O94964 1423 aa13.78□□□□□ -0.2
RN7SKP117-201ENST00000410175 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
RN7SKP117-201ENST00000410175 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
RN7SKP117-201ENST00000410175 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.21
RN7SKP117-201ENST00000410175 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
RN7SKP117-201ENST00000410175 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
RN7SKP117-201ENST00000410175 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
RN7SKP117-201ENST00000410175 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
RN7SKP117-201ENST00000410175 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
RN7SKP117-201ENST00000410175 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
RN7SKP117-201ENST00000410175 CUX1P39880 1505 aa13.63□□□□□ -0.23
RN7SKP117-201ENST00000410175 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
RN7SKP117-201ENST00000410175 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
RN7SKP117-201ENST00000410175 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
RN7SKP117-201ENST00000410175 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
RN7SKP117-201ENST00000410175 NUP160Q12769 1436 aa13.52□□□□□ -0.25
RN7SKP117-201ENST00000410175 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
RN7SKP117-201ENST00000410175 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
RN7SKP117-201ENST00000410175 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
RN7SKP117-201ENST00000410175 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
RN7SKP117-201ENST00000410175 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
RN7SKP117-201ENST00000410175 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
RN7SKP117-201ENST00000410175 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
RN7SKP117-201ENST00000410175 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
RN7SKP117-201ENST00000410175 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
RN7SKP117-201ENST00000410175 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
RN7SKP117-201ENST00000410175 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
RN7SKP117-201ENST00000410175 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
RN7SKP117-201ENST00000410175 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms