RNA–Protein interactions for RNA: ENST00000410019.3

CDCA7-203, Transcript of cell division cycle associated 7, humanhuman

TSL 2 BASIC

Gene CDCA7, Length 1,488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-203ENST00000410019 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
CDCA7-203ENST00000410019 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.54
CDCA7-203ENST00000410019 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
CDCA7-203ENST00000410019 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
CDCA7-203ENST00000410019 ABCC9O60706 1549 aa27.56■■■□□ 2
CDCA7-203ENST00000410019 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
CDCA7-203ENST00000410019 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
CDCA7-203ENST00000410019 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
CDCA7-203ENST00000410019 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
CDCA7-203ENST00000410019 NACADO15069 1562 aa26.97■■□□□ 1.91
CDCA7-203ENST00000410019 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
CDCA7-203ENST00000410019 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
CDCA7-203ENST00000410019 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
CDCA7-203ENST00000410019 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
CDCA7-203ENST00000410019 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.79
CDCA7-203ENST00000410019 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
CDCA7-203ENST00000410019 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
CDCA7-203ENST00000410019 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.736e-6■■□□□ 12.8
CDCA7-203ENST00000410019 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
CDCA7-203ENST00000410019 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
CDCA7-203ENST00000410019 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
CDCA7-203ENST00000410019 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
CDCA7-203ENST00000410019 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
CDCA7-203ENST00000410019 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
CDCA7-203ENST00000410019 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
CDCA7-203ENST00000410019 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
CDCA7-203ENST00000410019 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
CDCA7-203ENST00000410019 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
CDCA7-203ENST00000410019 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
CDCA7-203ENST00000410019 WIZO95785 1651 aa24.96■■□□□ 1.59
CDCA7-203ENST00000410019 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
CDCA7-203ENST00000410019 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
CDCA7-203ENST00000410019 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
CDCA7-203ENST00000410019 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CDCA7-203ENST00000410019 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
CDCA7-203ENST00000410019 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
CDCA7-203ENST00000410019 FOXD1Q16676 465 aa24.44■■□□□ 1.5
CDCA7-203ENST00000410019 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
CDCA7-203ENST00000410019 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
CDCA7-203ENST00000410019 CFTRP13569 1480 aa24.18■■□□□ 1.46
CDCA7-203ENST00000410019 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
CDCA7-203ENST00000410019 NESP48681 1621 aa24.04■■□□□ 1.44
CDCA7-203ENST00000410019 PRDM2Q13029 1718 aa24■■□□□ 1.43
CDCA7-203ENST00000410019 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
CDCA7-203ENST00000410019 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
CDCA7-203ENST00000410019 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
CDCA7-203ENST00000410019 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
CDCA7-203ENST00000410019 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
CDCA7-203ENST00000410019 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
CDCA7-203ENST00000410019 WRNQ14191 1432 aaPredicted RBP eCLIP23.71■■□□□ 1.39
CDCA7-203ENST00000410019 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
CDCA7-203ENST00000410019 CUX1P39880 1505 aa23.6■■□□□ 1.37
CDCA7-203ENST00000410019 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
CDCA7-203ENST00000410019 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
CDCA7-203ENST00000410019 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
CDCA7-203ENST00000410019 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
CDCA7-203ENST00000410019 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
CDCA7-203ENST00000410019 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
CDCA7-203ENST00000410019 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
CDCA7-203ENST00000410019 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
CDCA7-203ENST00000410019 WDR62O43379 1518 aa23.53■■□□□ 1.36
CDCA7-203ENST00000410019 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
CDCA7-203ENST00000410019 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
CDCA7-203ENST00000410019 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
CDCA7-203ENST00000410019 ADRA2BP18089 450 aa23.41■■□□□ 1.34
CDCA7-203ENST00000410019 SOGA1O94964 1423 aa23.35■■□□□ 1.33
CDCA7-203ENST00000410019 CUX2O14529 1486 aa23.33■■□□□ 1.32
CDCA7-203ENST00000410019 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
CDCA7-203ENST00000410019 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
CDCA7-203ENST00000410019 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
CDCA7-203ENST00000410019 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
CDCA7-203ENST00000410019 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
CDCA7-203ENST00000410019 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
CDCA7-203ENST00000410019 EEA1Q15075 1411 aa23.16■■□□□ 1.3
CDCA7-203ENST00000410019 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
CDCA7-203ENST00000410019 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
CDCA7-203ENST00000410019 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
CDCA7-203ENST00000410019 ABCA5Q8WWZ7 1642 aa23.09■■□□□ 1.29
CDCA7-203ENST00000410019 GAPVD1Q14C86 1478 aa23.07■■□□□ 1.28
CDCA7-203ENST00000410019 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.282e-9■■■■□ 25.7
CDCA7-203ENST00000410019 CSRNP3Q8WYN3 585 aa23.05■■□□□ 1.28
CDCA7-203ENST00000410019 IGF1RP08069 1367 aa23.04■■□□□ 1.28
CDCA7-203ENST00000410019 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
CDCA7-203ENST00000410019 PIAS4Q8N2W9 510 aaPredicted RBP23.03■■□□□ 1.28
CDCA7-203ENST00000410019 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
CDCA7-203ENST00000410019 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
CDCA7-203ENST00000410019 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
CDCA7-203ENST00000410019 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
CDCA7-203ENST00000410019 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
CDCA7-203ENST00000410019 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.26
CDCA7-203ENST00000410019 CUL7Q14999 1698 aa22.88■■□□□ 1.25
CDCA7-203ENST00000410019 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
CDCA7-203ENST00000410019 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
CDCA7-203ENST00000410019 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.24
CDCA7-203ENST00000410019 KIF21BO75037 1637 aa22.82■■□□□ 1.24
CDCA7-203ENST00000410019 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
CDCA7-203ENST00000410019 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
CDCA7-203ENST00000410019 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
CDCA7-203ENST00000410019 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
CDCA7-203ENST00000410019 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms