RNA–Protein interactions for RNA: ENST00000409798.5

NUP35-203, Transcript of nucleoporin 35, humanhuman

TSL 2 BASIC

Gene NUP35, Length 1,470 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-203ENST00000409798 TIA1P31483 386 aaKnown RBP eCLIP3.82□□□□□ -1.82e-21■■■■■ 63.2
NUP35-203ENST00000409798 TIAL1Q01085 375 aaKnown RBP eCLIP4.46□□□□□ -1.79e-16■■■■■ 53.3
NUP35-203ENST00000409798 RBM22Q9NW64 420 aaKnown RBP eCLIP2.77□□□□□ -1.978e-13■□□□□ 9.8
NUP35-203ENST00000409798 HNRNPMP52272 730 aaKnown RBP eCLIP4.37□□□□□ -1.719e-11■■■■■ 36.6
NUP35-203ENST00000409798 U2AF1Q01081 240 aaKnown RBP eCLIP5.18□□□□□ -1.581e-8■□□□□ 9.6
NUP35-203ENST00000409798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.172e-8■■■■□ 21.3
NUP35-203ENST00000409798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.67□□□□□ -1.826e-8■■■■□ 26.7
NUP35-203ENST00000409798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.31□□□□□ -1.561e-7■■■□□ 14.7
NUP35-203ENST00000409798 U2AF2P26368 475 aaKnown RBP eCLIP3.44□□□□□ -1.862e-7■■□□□ 13.4
NUP35-203ENST00000409798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.013e-7■■■■□ 21.4
NUP35-203ENST00000409798 HNRNPLP14866 589 aaKnown RBP eCLIP4.8□□□□□ -1.644e-7■■■■■ 46.5
NUP35-203ENST00000409798 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.117e-7■■■□□ 17.2
NUP35-203ENST00000409798 NCBP2P52298 156 aaKnown RBP eCLIP2.81□□□□□ -1.969e-7■■□□□ 13.6
NUP35-203ENST00000409798 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.14□□□□□ -1.759e-7■■■■□ 21.4
NUP35-203ENST00000409798 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.93□□□□□ -1.461e-6■■■■□ 24.1
NUP35-203ENST00000409798 AGGF1Q8N302 714 aaeCLIP5.77□□□□□ -1.492e-6■■■■□ 26.5
NUP35-203ENST00000409798 SF3B1O75533 1304 aaKnown RBP eCLIP3.43□□□□□ -1.863e-6■■■■■ 44.6
NUP35-203ENST00000409798 AQRO60306 1485 aaKnown RBP eCLIP3.03□□□□□ -1.924e-6■■■□□ 15.5
NUP35-203ENST00000409798 EFTUD2Q15029 972 aaKnown RBP eCLIP3.55□□□□□ -1.845e-6■■■■□ 23.8
NUP35-203ENST00000409798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.2□□□□□ -1.745e-6■■■□□ 15.9
NUP35-203ENST00000409798 SF3B4Q15427 424 aaKnown RBP eCLIP3.67□□□□□ -1.826e-6■□□□□ 11
NUP35-203ENST00000409798 MATR3P43243 847 aaKnown RBP eCLIP4.05□□□□□ -1.769e-6■■■■□ 21.7
Retrieved 22 of 22 RNA–protein pairs in 16.4 ms