RNA–Protein interactions for RNA: ENST00000409707.5

STAMBP-204, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene STAMBP, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-204ENST00000409707 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
STAMBP-204ENST00000409707 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
STAMBP-204ENST00000409707 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
STAMBP-204ENST00000409707 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
STAMBP-204ENST00000409707 ABCC9O60706 1549 aa26.84■■□□□ 1.89
STAMBP-204ENST00000409707 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
STAMBP-204ENST00000409707 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
STAMBP-204ENST00000409707 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
STAMBP-204ENST00000409707 PHF23Q9BUL5 403 aaPredicted RBP26.25■■□□□ 1.79
STAMBP-204ENST00000409707 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
STAMBP-204ENST00000409707 NACADO15069 1562 aa26.17■■□□□ 1.78
STAMBP-204ENST00000409707 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
STAMBP-204ENST00000409707 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
STAMBP-204ENST00000409707 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
STAMBP-204ENST00000409707 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
STAMBP-204ENST00000409707 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
STAMBP-204ENST00000409707 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
STAMBP-204ENST00000409707 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
STAMBP-204ENST00000409707 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
STAMBP-204ENST00000409707 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
STAMBP-204ENST00000409707 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
STAMBP-204ENST00000409707 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
STAMBP-204ENST00000409707 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
STAMBP-204ENST00000409707 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
STAMBP-204ENST00000409707 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
STAMBP-204ENST00000409707 PLPPR3Q6T4P5 718 aa24.32■■□□□ 1.48
STAMBP-204ENST00000409707 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
STAMBP-204ENST00000409707 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
STAMBP-204ENST00000409707 WIZO95785 1651 aa24.26■■□□□ 1.47
STAMBP-204ENST00000409707 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
STAMBP-204ENST00000409707 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
STAMBP-204ENST00000409707 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
STAMBP-204ENST00000409707 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
STAMBP-204ENST00000409707 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
STAMBP-204ENST00000409707 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
STAMBP-204ENST00000409707 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
STAMBP-204ENST00000409707 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.39
STAMBP-204ENST00000409707 FOXD1Q16676 465 aa23.56■■□□□ 1.36
STAMBP-204ENST00000409707 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
STAMBP-204ENST00000409707 CFTRP13569 1480 aa23.45■■□□□ 1.35
STAMBP-204ENST00000409707 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
STAMBP-204ENST00000409707 NESP48681 1621 aa23.38■■□□□ 1.33
STAMBP-204ENST00000409707 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
STAMBP-204ENST00000409707 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
STAMBP-204ENST00000409707 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
STAMBP-204ENST00000409707 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
STAMBP-204ENST00000409707 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
STAMBP-204ENST00000409707 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
STAMBP-204ENST00000409707 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
STAMBP-204ENST00000409707 ADRA2BP18089 450 aa23.06■■□□□ 1.28
STAMBP-204ENST00000409707 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.282e-6■■■■□ 22.3
STAMBP-204ENST00000409707 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
STAMBP-204ENST00000409707 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
STAMBP-204ENST00000409707 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
STAMBP-204ENST00000409707 CUX1P39880 1505 aa22.95■■□□□ 1.26
STAMBP-204ENST00000409707 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
STAMBP-204ENST00000409707 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
STAMBP-204ENST00000409707 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
STAMBP-204ENST00000409707 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
STAMBP-204ENST00000409707 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
STAMBP-204ENST00000409707 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
STAMBP-204ENST00000409707 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
STAMBP-204ENST00000409707 WDR62O43379 1518 aa22.85■■□□□ 1.25
STAMBP-204ENST00000409707 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
STAMBP-204ENST00000409707 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
STAMBP-204ENST00000409707 SOGA1O94964 1423 aa22.69■■□□□ 1.22
STAMBP-204ENST00000409707 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
STAMBP-204ENST00000409707 CUX2O14529 1486 aa22.64■■□□□ 1.21
STAMBP-204ENST00000409707 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
STAMBP-204ENST00000409707 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
STAMBP-204ENST00000409707 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
STAMBP-204ENST00000409707 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
STAMBP-204ENST00000409707 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
STAMBP-204ENST00000409707 EEA1Q15075 1411 aa22.5■■□□□ 1.19
STAMBP-204ENST00000409707 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
STAMBP-204ENST00000409707 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
STAMBP-204ENST00000409707 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
STAMBP-204ENST00000409707 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.19
STAMBP-204ENST00000409707 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
STAMBP-204ENST00000409707 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
STAMBP-204ENST00000409707 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.182e-7■■■□□ 19.2
STAMBP-204ENST00000409707 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
STAMBP-204ENST00000409707 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
STAMBP-204ENST00000409707 PIAS4Q8N2W9 510 aaPredicted RBP22.36■■□□□ 1.17
STAMBP-204ENST00000409707 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
STAMBP-204ENST00000409707 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
STAMBP-204ENST00000409707 IGF1RP08069 1367 aa22.33■■□□□ 1.16
STAMBP-204ENST00000409707 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
STAMBP-204ENST00000409707 CUL7Q14999 1698 aa22.25■■□□□ 1.15
STAMBP-204ENST00000409707 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
STAMBP-204ENST00000409707 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
STAMBP-204ENST00000409707 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
STAMBP-204ENST00000409707 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
STAMBP-204ENST00000409707 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
STAMBP-204ENST00000409707 KIF21BO75037 1637 aa22.19■■□□□ 1.14
STAMBP-204ENST00000409707 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
STAMBP-204ENST00000409707 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
STAMBP-204ENST00000409707 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
STAMBP-204ENST00000409707 GOLGA3Q08378 1498 aa22.14■■□□□ 1.14
STAMBP-204ENST00000409707 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms