RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
SAPCD2-201ENST00000409687 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
SAPCD2-201ENST00000409687 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
SAPCD2-201ENST00000409687 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
SAPCD2-201ENST00000409687 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
SAPCD2-201ENST00000409687 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
SAPCD2-201ENST00000409687 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
SAPCD2-201ENST00000409687 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
SAPCD2-201ENST00000409687 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
SAPCD2-201ENST00000409687 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
SAPCD2-201ENST00000409687 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
SAPCD2-201ENST00000409687 HRCP23327 699 aa23.97■■□□□ 1.43
SAPCD2-201ENST00000409687 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
SAPCD2-201ENST00000409687 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
SAPCD2-201ENST00000409687 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
SAPCD2-201ENST00000409687 CCER1Q8TC90 406 aaPredicted RBP23.41■■□□□ 1.34
SAPCD2-201ENST00000409687 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
SAPCD2-201ENST00000409687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
SAPCD2-201ENST00000409687 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
SAPCD2-201ENST00000409687 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
SAPCD2-201ENST00000409687 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
SAPCD2-201ENST00000409687 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
SAPCD2-201ENST00000409687 APLP2Q06481 763 aa23■■□□□ 1.27
SAPCD2-201ENST00000409687 ABCC9O60706 1549 aa22.88■■□□□ 1.25
SAPCD2-201ENST00000409687 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
SAPCD2-201ENST00000409687 CENPBP07199 599 aaPredicted RBP22.75■■□□□ 1.23
SAPCD2-201ENST00000409687 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
SAPCD2-201ENST00000409687 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
SAPCD2-201ENST00000409687 ITGAEP38570 1179 aa22.62■■□□□ 1.21
SAPCD2-201ENST00000409687 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
SAPCD2-201ENST00000409687 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
SAPCD2-201ENST00000409687 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
SAPCD2-201ENST00000409687 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
SAPCD2-201ENST00000409687 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
SAPCD2-201ENST00000409687 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
SAPCD2-201ENST00000409687 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
SAPCD2-201ENST00000409687 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
SAPCD2-201ENST00000409687 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
SAPCD2-201ENST00000409687 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
SAPCD2-201ENST00000409687 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
SAPCD2-201ENST00000409687 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
SAPCD2-201ENST00000409687 ZNF316A6NFI3 1004 aaPredicted RBP22.07■■□□□ 1.12
SAPCD2-201ENST00000409687 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
SAPCD2-201ENST00000409687 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
SAPCD2-201ENST00000409687 BCANQ96GW7 911 aa21.95■■□□□ 1.1
SAPCD2-201ENST00000409687 MIER1Q8N108 512 aa21.89■■□□□ 1.1
SAPCD2-201ENST00000409687 P3H3Q8IVL6 736 aa21.89■■□□□ 1.09
SAPCD2-201ENST00000409687 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.09
SAPCD2-201ENST00000409687 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
SAPCD2-201ENST00000409687 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
SAPCD2-201ENST00000409687 SOGA1O94964 1423 aa21.75■■□□□ 1.07
SAPCD2-201ENST00000409687 NEFLP07196 543 aa21.74■■□□□ 1.07
SAPCD2-201ENST00000409687 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
SAPCD2-201ENST00000409687 HIRIP3Q9BW71 556 aaPredicted RBP21.68■■□□□ 1.06
SAPCD2-201ENST00000409687 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
SAPCD2-201ENST00000409687 ARID3CA6NKF2 412 aa21.64■■□□□ 1.05
SAPCD2-201ENST00000409687 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
SAPCD2-201ENST00000409687 CLIP1P30622 1438 aa21.56■■□□□ 1.04
SAPCD2-201ENST00000409687 WIZO95785 1651 aa21.55■■□□□ 1.04
SAPCD2-201ENST00000409687 ERICH6Q7L0X2 663 aa21.53■■□□□ 1.04
SAPCD2-201ENST00000409687 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
SAPCD2-201ENST00000409687 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
SAPCD2-201ENST00000409687 TNIKQ9UKE5 1360 aa21.45■■□□□ 1.02
SAPCD2-201ENST00000409687 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
SAPCD2-201ENST00000409687 TRIM52Q96A61 297 aa21.42■■□□□ 1.02
SAPCD2-201ENST00000409687 GOLGA3Q08378 1498 aa21.37■■□□□ 1.01
SAPCD2-201ENST00000409687 FKBP8Q14318 412 aa21.36■■□□□ 1.01
SAPCD2-201ENST00000409687 NACADO15069 1562 aa21.36■■□□□ 1.01
SAPCD2-201ENST00000409687 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
SAPCD2-201ENST00000409687 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
SAPCD2-201ENST00000409687 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
SAPCD2-201ENST00000409687 ANP32CO43423 234 aa21.29■■□□□ 1
SAPCD2-201ENST00000409687 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
SAPCD2-201ENST00000409687 MYT1Q01538 1121 aa21.27■■□□□ 1
SAPCD2-201ENST00000409687 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
SAPCD2-201ENST00000409687 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
SAPCD2-201ENST00000409687 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
SAPCD2-201ENST00000409687 EEA1Q15075 1411 aa21.16■□□□□ 0.98
SAPCD2-201ENST00000409687 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
SAPCD2-201ENST00000409687 KCNH8Q96L42 1107 aa21.15■□□□□ 0.98
SAPCD2-201ENST00000409687 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
SAPCD2-201ENST00000409687 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
SAPCD2-201ENST00000409687 FBLN2P98095 1184 aa21.06■□□□□ 0.96
SAPCD2-201ENST00000409687 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
SAPCD2-201ENST00000409687 FAM9BQ8IZU0 186 aa21.04■□□□□ 0.96
SAPCD2-201ENST00000409687 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
SAPCD2-201ENST00000409687 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
SAPCD2-201ENST00000409687 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
SAPCD2-201ENST00000409687 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
SAPCD2-201ENST00000409687 ZNF777Q9ULD5 760 aaPredicted RBP21.01■□□□□ 0.95
SAPCD2-201ENST00000409687 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
SAPCD2-201ENST00000409687 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
SAPCD2-201ENST00000409687 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
SAPCD2-201ENST00000409687 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.94
SAPCD2-201ENST00000409687 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
SAPCD2-201ENST00000409687 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
SAPCD2-201ENST00000409687 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
SAPCD2-201ENST00000409687 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
SAPCD2-201ENST00000409687 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
SAPCD2-201ENST00000409687 DHX57Q6P158 1386 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms