RNA–Protein interactions for RNA: ENST00000409579.5

AFF3-203, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene AFF3, Length 4,342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-203ENST00000409579 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
AFF3-203ENST00000409579 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
AFF3-203ENST00000409579 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.68
AFF3-203ENST00000409579 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.66
AFF3-203ENST00000409579 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
AFF3-203ENST00000409579 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
AFF3-203ENST00000409579 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
AFF3-203ENST00000409579 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
AFF3-203ENST00000409579 TTBK1Q5TCY1 1321 aaPredicted RBP23.61■■□□□ 1.37
AFF3-203ENST00000409579 APLP2Q06481 763 aa23.5■■□□□ 1.35
AFF3-203ENST00000409579 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
AFF3-203ENST00000409579 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
AFF3-203ENST00000409579 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
AFF3-203ENST00000409579 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
AFF3-203ENST00000409579 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
AFF3-203ENST00000409579 CCER1Q8TC90 406 aaPredicted RBP22.98■■□□□ 1.27
AFF3-203ENST00000409579 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
AFF3-203ENST00000409579 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
AFF3-203ENST00000409579 ABCC9O60706 1549 aa22.8■■□□□ 1.24
AFF3-203ENST00000409579 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
AFF3-203ENST00000409579 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
AFF3-203ENST00000409579 HRCP23327 699 aa22.56■■□□□ 1.2
AFF3-203ENST00000409579 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
AFF3-203ENST00000409579 CENPBP07199 599 aaPredicted RBP22.43■■□□□ 1.18
AFF3-203ENST00000409579 ITGAEP38570 1179 aa22.39■■□□□ 1.17
AFF3-203ENST00000409579 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
AFF3-203ENST00000409579 YTHDC1Q96MU7 727 aaKnown RBP22.32■■□□□ 1.16
AFF3-203ENST00000409579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
AFF3-203ENST00000409579 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
AFF3-203ENST00000409579 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
AFF3-203ENST00000409579 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
AFF3-203ENST00000409579 FAM50AQ14320 339 aaKnown RBP21.82■■□□□ 1.08
AFF3-203ENST00000409579 NEFLP07196 543 aa21.81■■□□□ 1.08
AFF3-203ENST00000409579 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
AFF3-203ENST00000409579 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.07
AFF3-203ENST00000409579 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
AFF3-203ENST00000409579 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
AFF3-203ENST00000409579 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
AFF3-203ENST00000409579 P3H3Q8IVL6 736 aa21.67■■□□□ 1.06
AFF3-203ENST00000409579 NEUROD1Q13562 356 aa21.61■■□□□ 1.05
AFF3-203ENST00000409579 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
AFF3-203ENST00000409579 FBLN2P98095 1184 aa21.55■■□□□ 1.04
AFF3-203ENST00000409579 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
AFF3-203ENST00000409579 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
AFF3-203ENST00000409579 ARID3CA6NKF2 412 aa21.5■■□□□ 1.03
AFF3-203ENST00000409579 MYT1Q01538 1121 aa21.47■■□□□ 1.03
AFF3-203ENST00000409579 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
AFF3-203ENST00000409579 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
AFF3-203ENST00000409579 ZNF316A6NFI3 1004 aaPredicted RBP21.36■■□□□ 1.01
AFF3-203ENST00000409579 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
AFF3-203ENST00000409579 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
AFF3-203ENST00000409579 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
AFF3-203ENST00000409579 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
AFF3-203ENST00000409579 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
AFF3-203ENST00000409579 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
AFF3-203ENST00000409579 NACADO15069 1562 aa21.15■□□□□ 0.98
AFF3-203ENST00000409579 ANP32CO43423 234 aa21.12■□□□□ 0.97
AFF3-203ENST00000409579 BCANQ96GW7 911 aa21.1■□□□□ 0.97
AFF3-203ENST00000409579 CLIP1P30622 1438 aa21.06■□□□□ 0.96
AFF3-203ENST00000409579 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
AFF3-203ENST00000409579 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
AFF3-203ENST00000409579 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
AFF3-203ENST00000409579 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
AFF3-203ENST00000409579 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
AFF3-203ENST00000409579 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
AFF3-203ENST00000409579 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
AFF3-203ENST00000409579 EEA1Q15075 1411 aa20.89■□□□□ 0.94
AFF3-203ENST00000409579 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
AFF3-203ENST00000409579 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
AFF3-203ENST00000409579 TONSLQ96HA7 1378 aa20.87■□□□□ 0.93
AFF3-203ENST00000409579 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
AFF3-203ENST00000409579 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
AFF3-203ENST00000409579 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
AFF3-203ENST00000409579 TNIKQ9UKE5 1360 aa20.83■□□□□ 0.92
AFF3-203ENST00000409579 SOGA1O94964 1423 aa20.8■□□□□ 0.92
AFF3-203ENST00000409579 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
AFF3-203ENST00000409579 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
AFF3-203ENST00000409579 MIER1Q8N108 512 aa20.74■□□□□ 0.91
AFF3-203ENST00000409579 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
AFF3-203ENST00000409579 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
AFF3-203ENST00000409579 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
AFF3-203ENST00000409579 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
AFF3-203ENST00000409579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.9
AFF3-203ENST00000409579 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
AFF3-203ENST00000409579 TSPY4P0CV99 314 aa20.64■□□□□ 0.89
AFF3-203ENST00000409579 TSPY10P0CW01 314 aa20.64■□□□□ 0.89
AFF3-203ENST00000409579 HNRNPUQ00839 825 aaKnown RBP eCLIP20.63■□□□□ 0.89
AFF3-203ENST00000409579 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
AFF3-203ENST00000409579 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
AFF3-203ENST00000409579 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
AFF3-203ENST00000409579 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
AFF3-203ENST00000409579 FKBP8Q14318 412 aa20.59■□□□□ 0.89
AFF3-203ENST00000409579 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
AFF3-203ENST00000409579 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
AFF3-203ENST00000409579 KCNH8Q96L42 1107 aa20.52■□□□□ 0.88
AFF3-203ENST00000409579 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
AFF3-203ENST00000409579 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
AFF3-203ENST00000409579 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
AFF3-203ENST00000409579 CUX2O14529 1486 aa20.49■□□□□ 0.87
AFF3-203ENST00000409579 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms