RNA–Protein interactions for RNA: ENST00000409573.6

ZC3H8-202, Transcript of zinc finger CCCH-type containing 8, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZC3H8, Length 5,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-202ENST00000409573 PTBP1P26599 531 aaKnown RBP eCLIP6.99□□□□□ -1.295e-30■■■■■ 107.1
ZC3H8-202ENST00000409573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.024e-12■■■■■ 83.8
ZC3H8-202ENST00000409573 SF3B1O75533 1304 aaKnown RBP eCLIP7.51□□□□□ -1.219e-6■■■■■ 68.9
ZC3H8-202ENST00000409573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.314e-7■■■■■ 68.2
ZC3H8-202ENST00000409573 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.17□□□□□ -1.262e-6■■■■■ 54.9
ZC3H8-202ENST00000409573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.45□□□□□ -1.384e-26■■■■■ 50.6
ZC3H8-202ENST00000409573 GTF2F1P35269 517 aaKnown RBP eCLIP8.19□□□□□ -1.14e-9■■■■■ 36.5
ZC3H8-202ENST00000409573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.219e-8■■■■■ 27
ZC3H8-202ENST00000409573 NCBP2P52298 156 aaKnown RBP eCLIP6.8□□□□□ -1.329e-7■■■■□ 25.5
ZC3H8-202ENST00000409573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.961e-6■■■■□ 21.2
ZC3H8-202ENST00000409573 AGGF1Q8N302 714 aaeCLIP7.27□□□□□ -1.257e-7■■■■□ 20.6
ZC3H8-202ENST00000409573 HNRNPLP14866 589 aaKnown RBP eCLIP7.12□□□□□ -1.272e-12■■■□□ 17.9
ZC3H8-202ENST00000409573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■■□□ 16.8
ZC3H8-202ENST00000409573 U2AF2P26368 475 aaKnown RBP eCLIP8.19□□□□□ -1.19e-8■■■□□ 16.4
ZC3H8-202ENST00000409573 KHSRPQ92945 711 aaKnown RBP eCLIP7.48□□□□□ -1.219e-7■■■□□ 15.7
ZC3H8-202ENST00000409573 QKIQ96PU8 341 aaKnown RBP eCLIP7.33□□□□□ -1.246e-8■■■□□ 15.4
ZC3H8-202ENST00000409573 DDX3XO00571 662 aaKnown RBP eCLIP7.69□□□□□ -1.181e-6■■□□□ 14.5
ZC3H8-202ENST00000409573 ZNF622Q969S3 477 aaKnown RBP eCLIP8.93□□□□□ -0.986e-7■■□□□ 11.8
ZC3H8-202ENST00000409573 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.78□□□□□ -1.323e-6■■□□□ 11.5
ZC3H8-202ENST00000409573 NIPBLQ6KC79 2804 aaeCLIP5.9□□□□□ -1.477e-6■□□□□ 10.5
ZC3H8-202ENST00000409573 PRPF4O43172 522 aaKnown RBP eCLIP7.13□□□□□ -1.273e-6■□□□□ 10
ZC3H8-202ENST00000409573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.745e-7■□□□□ 9.5
ZC3H8-202ENST00000409573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.363e-6■□□□□ 9.1
ZC3H8-202ENST00000409573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.84□□□□□ -1.153e-6■□□□□ 8.5
Retrieved 24 of 24 RNA–protein pairs in 5.7 ms