RNA–Protein interactions for RNA: ENST00000407797.6

C5orf56-204, Transcript of chromosome 5 open reading frame 56, humanhuman

TSL 5

Gene C5orf56, Length 1,570 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-204ENST00000407797 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
C5orf56-204ENST00000407797 CCDC180Q9P1Z9 1646 aa27.32■■□□□ 1.96
C5orf56-204ENST00000407797 ABCC9O60706 1549 aa26.8■■□□□ 1.88
C5orf56-204ENST00000407797 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
C5orf56-204ENST00000407797 NACADO15069 1562 aa25.7■■□□□ 1.71
C5orf56-204ENST00000407797 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
C5orf56-204ENST00000407797 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
C5orf56-204ENST00000407797 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
C5orf56-204ENST00000407797 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
C5orf56-204ENST00000407797 UNC13AQ9UPW8 1703 aa25.16■■□□□ 1.62
C5orf56-204ENST00000407797 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
C5orf56-204ENST00000407797 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
C5orf56-204ENST00000407797 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
C5orf56-204ENST00000407797 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
C5orf56-204ENST00000407797 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
C5orf56-204ENST00000407797 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
C5orf56-204ENST00000407797 CC2D2AQ9P2K1 1620 aa24.26■■□□□ 1.47
C5orf56-204ENST00000407797 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
C5orf56-204ENST00000407797 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
C5orf56-204ENST00000407797 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
C5orf56-204ENST00000407797 BAZ1AQ9NRL2 1556 aaPredicted RBP23.76■■□□□ 1.39
C5orf56-204ENST00000407797 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
C5orf56-204ENST00000407797 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
C5orf56-204ENST00000407797 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
C5orf56-204ENST00000407797 HMGXB3Q12766 1538 aa23.58■■□□□ 1.37
C5orf56-204ENST00000407797 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
C5orf56-204ENST00000407797 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
C5orf56-204ENST00000407797 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
C5orf56-204ENST00000407797 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
C5orf56-204ENST00000407797 WIZO95785 1651 aa23.32■■□□□ 1.32
C5orf56-204ENST00000407797 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
C5orf56-204ENST00000407797 NESP48681 1621 aa23.13■■□□□ 1.29
C5orf56-204ENST00000407797 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
C5orf56-204ENST00000407797 TOP2AP11388 1531 aaKnown RBP23.09■■□□□ 1.29
C5orf56-204ENST00000407797 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
C5orf56-204ENST00000407797 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
C5orf56-204ENST00000407797 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
C5orf56-204ENST00000407797 CUX2O14529 1486 aa22.95■■□□□ 1.26
C5orf56-204ENST00000407797 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
C5orf56-204ENST00000407797 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
C5orf56-204ENST00000407797 CFTRP13569 1480 aa22.83■■□□□ 1.25
C5orf56-204ENST00000407797 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
C5orf56-204ENST00000407797 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
C5orf56-204ENST00000407797 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
C5orf56-204ENST00000407797 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
C5orf56-204ENST00000407797 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
C5orf56-204ENST00000407797 WDR62O43379 1518 aa22.65■■□□□ 1.22
C5orf56-204ENST00000407797 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
C5orf56-204ENST00000407797 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
C5orf56-204ENST00000407797 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
C5orf56-204ENST00000407797 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
C5orf56-204ENST00000407797 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
C5orf56-204ENST00000407797 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
C5orf56-204ENST00000407797 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
C5orf56-204ENST00000407797 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
C5orf56-204ENST00000407797 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
C5orf56-204ENST00000407797 CUX1P39880 1505 aa22.12■■□□□ 1.13
C5orf56-204ENST00000407797 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
C5orf56-204ENST00000407797 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
C5orf56-204ENST00000407797 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.13
C5orf56-204ENST00000407797 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
C5orf56-204ENST00000407797 SOGA1O94964 1423 aa22.07■■□□□ 1.12
C5orf56-204ENST00000407797 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
C5orf56-204ENST00000407797 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
C5orf56-204ENST00000407797 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
C5orf56-204ENST00000407797 WDR97A6NE52 1622 aa22■■□□□ 1.11
C5orf56-204ENST00000407797 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
C5orf56-204ENST00000407797 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
C5orf56-204ENST00000407797 EEA1Q15075 1411 aa21.95■■□□□ 1.11
C5orf56-204ENST00000407797 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
C5orf56-204ENST00000407797 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
C5orf56-204ENST00000407797 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
C5orf56-204ENST00000407797 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
C5orf56-204ENST00000407797 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
C5orf56-204ENST00000407797 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
C5orf56-204ENST00000407797 CHD1O14646 1710 aa21.83■■□□□ 1.09
C5orf56-204ENST00000407797 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.08
C5orf56-204ENST00000407797 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
C5orf56-204ENST00000407797 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
C5orf56-204ENST00000407797 FBLN2P98095 1184 aa21.81■■□□□ 1.08
C5orf56-204ENST00000407797 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
C5orf56-204ENST00000407797 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
C5orf56-204ENST00000407797 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
C5orf56-204ENST00000407797 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
C5orf56-204ENST00000407797 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
C5orf56-204ENST00000407797 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
C5orf56-204ENST00000407797 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
C5orf56-204ENST00000407797 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
C5orf56-204ENST00000407797 GOLGA3Q08378 1498 aa21.59■■□□□ 1.05
C5orf56-204ENST00000407797 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
C5orf56-204ENST00000407797 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
C5orf56-204ENST00000407797 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
C5orf56-204ENST00000407797 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
C5orf56-204ENST00000407797 KIF21BO75037 1637 aa21.54■■□□□ 1.04
C5orf56-204ENST00000407797 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms