RNA–Protein interactions for RNA: ENST00000407635.2

AC011298.1-201, humanhuman

TSL 2 BASIC

Gene AC011298.1, Length 3,398 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011298.1-201ENST00000407635 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
AC011298.1-201ENST00000407635 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
AC011298.1-201ENST00000407635 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.55
AC011298.1-201ENST00000407635 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
AC011298.1-201ENST00000407635 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
AC011298.1-201ENST00000407635 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
AC011298.1-201ENST00000407635 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
AC011298.1-201ENST00000407635 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
AC011298.1-201ENST00000407635 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
AC011298.1-201ENST00000407635 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
AC011298.1-201ENST00000407635 HRCP23327 699 aa23.11■■□□□ 1.29
AC011298.1-201ENST00000407635 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
AC011298.1-201ENST00000407635 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
AC011298.1-201ENST00000407635 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
AC011298.1-201ENST00000407635 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
AC011298.1-201ENST00000407635 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
AC011298.1-201ENST00000407635 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
AC011298.1-201ENST00000407635 ABCC9O60706 1549 aa22.78■■□□□ 1.24
AC011298.1-201ENST00000407635 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
AC011298.1-201ENST00000407635 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
AC011298.1-201ENST00000407635 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
AC011298.1-201ENST00000407635 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
AC011298.1-201ENST00000407635 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.16
AC011298.1-201ENST00000407635 NACADO15069 1562 aa22.25■■□□□ 1.15
AC011298.1-201ENST00000407635 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
AC011298.1-201ENST00000407635 WIZO95785 1651 aa22.19■■□□□ 1.14
AC011298.1-201ENST00000407635 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
AC011298.1-201ENST00000407635 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
AC011298.1-201ENST00000407635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
AC011298.1-201ENST00000407635 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
AC011298.1-201ENST00000407635 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
AC011298.1-201ENST00000407635 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
AC011298.1-201ENST00000407635 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
AC011298.1-201ENST00000407635 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
AC011298.1-201ENST00000407635 SOGA1O94964 1423 aa21.74■■□□□ 1.07
AC011298.1-201ENST00000407635 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
AC011298.1-201ENST00000407635 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
AC011298.1-201ENST00000407635 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
AC011298.1-201ENST00000407635 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
AC011298.1-201ENST00000407635 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
AC011298.1-201ENST00000407635 CEP162Q5TB80 1403 aa21.62■■□□□ 1.05
AC011298.1-201ENST00000407635 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
AC011298.1-201ENST00000407635 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
AC011298.1-201ENST00000407635 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
AC011298.1-201ENST00000407635 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
AC011298.1-201ENST00000407635 TNIKQ9UKE5 1360 aa21.46■■□□□ 1.03
AC011298.1-201ENST00000407635 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
AC011298.1-201ENST00000407635 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
AC011298.1-201ENST00000407635 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
AC011298.1-201ENST00000407635 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
AC011298.1-201ENST00000407635 APLP2Q06481 763 aa21.34■■□□□ 1.01
AC011298.1-201ENST00000407635 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
AC011298.1-201ENST00000407635 EEA1Q15075 1411 aa21.32■■□□□ 1
AC011298.1-201ENST00000407635 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
AC011298.1-201ENST00000407635 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
AC011298.1-201ENST00000407635 CLIP1P30622 1438 aa21.23■□□□□ 0.99
AC011298.1-201ENST00000407635 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
AC011298.1-201ENST00000407635 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
AC011298.1-201ENST00000407635 YTHDC1Q96MU7 727 aaKnown RBP21.2■□□□□ 0.99
AC011298.1-201ENST00000407635 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
AC011298.1-201ENST00000407635 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
AC011298.1-201ENST00000407635 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
AC011298.1-201ENST00000407635 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
AC011298.1-201ENST00000407635 CENPBP07199 599 aaPredicted RBP21.09■□□□□ 0.97
AC011298.1-201ENST00000407635 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.97
AC011298.1-201ENST00000407635 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
AC011298.1-201ENST00000407635 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
AC011298.1-201ENST00000407635 ITGAEP38570 1179 aa21■□□□□ 0.95
AC011298.1-201ENST00000407635 KIF21BO75037 1637 aa20.95■□□□□ 0.94
AC011298.1-201ENST00000407635 MIER1Q8N108 512 aa20.94■□□□□ 0.94
AC011298.1-201ENST00000407635 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
AC011298.1-201ENST00000407635 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
AC011298.1-201ENST00000407635 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
AC011298.1-201ENST00000407635 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
AC011298.1-201ENST00000407635 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
AC011298.1-201ENST00000407635 P3H3Q8IVL6 736 aa20.76■□□□□ 0.91
AC011298.1-201ENST00000407635 CUX1P39880 1505 aa20.74■□□□□ 0.91
AC011298.1-201ENST00000407635 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
AC011298.1-201ENST00000407635 PRXQ9BXM0 1461 aa20.72■□□□□ 0.91
AC011298.1-201ENST00000407635 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
AC011298.1-201ENST00000407635 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
AC011298.1-201ENST00000407635 CUX2O14529 1486 aa20.63■□□□□ 0.89
AC011298.1-201ENST00000407635 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
AC011298.1-201ENST00000407635 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
AC011298.1-201ENST00000407635 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
AC011298.1-201ENST00000407635 CFTRP13569 1480 aa20.6■□□□□ 0.89
AC011298.1-201ENST00000407635 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
AC011298.1-201ENST00000407635 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
AC011298.1-201ENST00000407635 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
AC011298.1-201ENST00000407635 IGF1RP08069 1367 aa20.54■□□□□ 0.88
AC011298.1-201ENST00000407635 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
AC011298.1-201ENST00000407635 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
AC011298.1-201ENST00000407635 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
AC011298.1-201ENST00000407635 RRBP1Q9P2E9 1410 aaKnown RBP20.45■□□□□ 0.86
AC011298.1-201ENST00000407635 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
AC011298.1-201ENST00000407635 RAB3GAP2Q9H2M9 1393 aa20.44■□□□□ 0.86
AC011298.1-201ENST00000407635 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
AC011298.1-201ENST00000407635 HIRIP3Q9BW71 556 aaPredicted RBP20.41■□□□□ 0.86
AC011298.1-201ENST00000407635 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
AC011298.1-201ENST00000407635 KCNH8Q96L42 1107 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms