RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
NOLC1-202ENST00000405356 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
NOLC1-202ENST00000405356 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
NOLC1-202ENST00000405356 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
NOLC1-202ENST00000405356 ABCC9O60706 1549 aa15.22■□□□□ 0.03
NOLC1-202ENST00000405356 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
NOLC1-202ENST00000405356 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
NOLC1-202ENST00000405356 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
NOLC1-202ENST00000405356 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
NOLC1-202ENST00000405356 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
NOLC1-202ENST00000405356 NACADO15069 1562 aa14.49□□□□□ -0.09
NOLC1-202ENST00000405356 RB1CC1Q8TDY2 1594 aa14.48□□□□□ -0.09
NOLC1-202ENST00000405356 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
NOLC1-202ENST00000405356 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
NOLC1-202ENST00000405356 FAM9AQ8IZU1 332 aaPredicted RBP14.12□□□□□ -0.15
NOLC1-202ENST00000405356 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
NOLC1-202ENST00000405356 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
NOLC1-202ENST00000405356 RSF1Q96T23 1441 aaPredicted RBP14.06□□□□□ -0.16
NOLC1-202ENST00000405356 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
NOLC1-202ENST00000405356 HRCP23327 699 aa13.97□□□□□ -0.17
NOLC1-202ENST00000405356 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
NOLC1-202ENST00000405356 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
NOLC1-202ENST00000405356 PCGF6Q9BYE7 350 aa13.92□□□□□ -0.18
NOLC1-202ENST00000405356 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
NOLC1-202ENST00000405356 WIZO95785 1651 aa13.8□□□□□ -0.2
NOLC1-202ENST00000405356 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
NOLC1-202ENST00000405356 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
NOLC1-202ENST00000405356 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
NOLC1-202ENST00000405356 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
NOLC1-202ENST00000405356 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
NOLC1-202ENST00000405356 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
NOLC1-202ENST00000405356 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
NOLC1-202ENST00000405356 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
NOLC1-202ENST00000405356 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
NOLC1-202ENST00000405356 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
NOLC1-202ENST00000405356 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
NOLC1-202ENST00000405356 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
NOLC1-202ENST00000405356 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
NOLC1-202ENST00000405356 APLP2Q06481 763 aa13.44□□□□□ -0.26
NOLC1-202ENST00000405356 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
NOLC1-202ENST00000405356 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
NOLC1-202ENST00000405356 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
NOLC1-202ENST00000405356 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
NOLC1-202ENST00000405356 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
NOLC1-202ENST00000405356 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
NOLC1-202ENST00000405356 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
NOLC1-202ENST00000405356 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
NOLC1-202ENST00000405356 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
NOLC1-202ENST00000405356 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
NOLC1-202ENST00000405356 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
NOLC1-202ENST00000405356 SOGA1O94964 1423 aa13.26□□□□□ -0.29
NOLC1-202ENST00000405356 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
NOLC1-202ENST00000405356 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
NOLC1-202ENST00000405356 FBLN2P98095 1184 aa13.23□□□□□ -0.29
NOLC1-202ENST00000405356 ERCC6Q03468 1493 aa13.21□□□□□ -0.3
NOLC1-202ENST00000405356 NESP48681 1621 aa13.19□□□□□ -0.3
NOLC1-202ENST00000405356 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
NOLC1-202ENST00000405356 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
NOLC1-202ENST00000405356 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
NOLC1-202ENST00000405356 EEA1Q15075 1411 aa13.16□□□□□ -0.3
NOLC1-202ENST00000405356 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
NOLC1-202ENST00000405356 CFTRP13569 1480 aa13.15□□□□□ -0.31
NOLC1-202ENST00000405356 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
NOLC1-202ENST00000405356 CUX2O14529 1486 aa13.13□□□□□ -0.31
NOLC1-202ENST00000405356 CEP164Q9UPV0 1460 aa13.12□□□□□ -0.31
NOLC1-202ENST00000405356 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
NOLC1-202ENST00000405356 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
NOLC1-202ENST00000405356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
NOLC1-202ENST00000405356 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
NOLC1-202ENST00000405356 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
NOLC1-202ENST00000405356 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
NOLC1-202ENST00000405356 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
NOLC1-202ENST00000405356 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.32
NOLC1-202ENST00000405356 CLIP1P30622 1438 aa13.02□□□□□ -0.33
NOLC1-202ENST00000405356 ITGAEP38570 1179 aa13.01□□□□□ -0.33
NOLC1-202ENST00000405356 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
NOLC1-202ENST00000405356 ARID3CA6NKF2 412 aa13□□□□□ -0.33
NOLC1-202ENST00000405356 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
NOLC1-202ENST00000405356 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
NOLC1-202ENST00000405356 CUX1P39880 1505 aa13□□□□□ -0.33
NOLC1-202ENST00000405356 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
NOLC1-202ENST00000405356 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
NOLC1-202ENST00000405356 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
NOLC1-202ENST00000405356 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
NOLC1-202ENST00000405356 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
NOLC1-202ENST00000405356 LAMC3Q9Y6N6 1575 aa12.93□□□□□ -0.34
NOLC1-202ENST00000405356 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
NOLC1-202ENST00000405356 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
NOLC1-202ENST00000405356 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
NOLC1-202ENST00000405356 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
NOLC1-202ENST00000405356 IGF1RP08069 1367 aa12.87□□□□□ -0.35
NOLC1-202ENST00000405356 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
NOLC1-202ENST00000405356 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
NOLC1-202ENST00000405356 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
NOLC1-202ENST00000405356 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■□ 26
NOLC1-202ENST00000405356 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
NOLC1-202ENST00000405356 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
NOLC1-202ENST00000405356 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
NOLC1-202ENST00000405356 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
NOLC1-202ENST00000405356 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms