RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.392e-15■■□□□ 12.5
NUCB1-201ENST00000405315 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.191e-14■■■■■ 48.8
NUCB1-201ENST00000405315 PCBP2Q15366 365 aaKnown RBP eCLIP14.42□□□□□ -0.11e-12■■■□□ 15.2
NUCB1-201ENST00000405315 ZNF622Q969S3 477 aaKnown RBP eCLIP15.88■□□□□ 0.131e-11■□□□□ 10.1
NUCB1-201ENST00000405315 FTOQ9C0B1 505 aaKnown RBP eCLIP17.21■□□□□ 0.351e-11■■■■■ 54.4
NUCB1-201ENST00000405315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.96■□□□□ 0.155e-11■■■■□ 21.7
NUCB1-201ENST00000405315 PCBP1Q15365 356 aaKnown RBP eCLIP14.91□□□□□ -0.021e-10■■■■■ 27.4
NUCB1-201ENST00000405315 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.154e-10■■■■□ 20.3
NUCB1-201ENST00000405315 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.127e-10■■■■■ 31.5
NUCB1-201ENST00000405315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.15□□□□□ -0.142e-9■■■□□ 18.3
NUCB1-201ENST00000405315 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.032e-9■□□□□ 10.8
NUCB1-201ENST00000405315 PABPC4Q13310 644 aaKnown RBP eCLIP16.06■□□□□ 0.163e-9■■■□□ 15
NUCB1-201ENST00000405315 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.188e-9■■■□□ 18.5
NUCB1-201ENST00000405315 GTF2F1P35269 517 aaKnown RBP eCLIP17.23■□□□□ 0.353e-8■■■■□ 26
NUCB1-201ENST00000405315 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.264e-8■■■■■ 78.2
NUCB1-201ENST00000405315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.744e-8■□□□□ 11.3
NUCB1-201ENST00000405315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.62□□□□□ -0.078e-8■■■■■ 27.2
NUCB1-201ENST00000405315 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.329e-8■■■□□ 18
NUCB1-201ENST00000405315 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.379e-8■■□□□ 11.6
NUCB1-201ENST00000405315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.221e-7■□□□□ 10.1
NUCB1-201ENST00000405315 DKC1O60832 514 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■■■■ 60.3
NUCB1-201ENST00000405315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■■□□ 16
NUCB1-201ENST00000405315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.253e-7■■■■■ 53.8
NUCB1-201ENST00000405315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.173e-7■■■■□ 25
NUCB1-201ENST00000405315 RPS3P23396 243 aaKnown RBP eCLIP14.34□□□□□ -0.113e-7■■■■□ 20.5
NUCB1-201ENST00000405315 TARDBPQ13148 414 aaKnown RBP eCLIP13.88□□□□□ -0.193e-7■■■■□ 20.5
NUCB1-201ENST00000405315 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.11□□□□□ -0.154e-7■■■□□ 15.2
NUCB1-201ENST00000405315 AKAP1Q92667 903 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■■■■□ 26.7
NUCB1-201ENST00000405315 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.155e-7■□□□□ 8.2
NUCB1-201ENST00000405315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.23■□□□□ 0.036e-7■□□□□ 10.2
NUCB1-201ENST00000405315 LARP4Q71RC2 724 aaKnown RBP eCLIP14.68□□□□□ -0.068e-7■■■□□ 18.6
NUCB1-201ENST00000405315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.62■□□□□ 0.098e-7■■■■■ 34.5
NUCB1-201ENST00000405315 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.869e-7■■■■■ 39.4
NUCB1-201ENST00000405315 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.399e-7■■■■□ 21.1
NUCB1-201ENST00000405315 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■□□ 17.6
NUCB1-201ENST00000405315 DDX3XO00571 662 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■□□□ 11.5
NUCB1-201ENST00000405315 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■■■ 26.9
NUCB1-201ENST00000405315 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■□□□ 12.6
NUCB1-201ENST00000405315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.751e-6■■□□□ 11.9
NUCB1-201ENST00000405315 ILF3Q12906 894 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■□ 23.5
NUCB1-201ENST00000405315 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■□□□□ 9.1
NUCB1-201ENST00000405315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.06■□□□□ 02e-6■■■■■ 36.5
NUCB1-201ENST00000405315 EFTUD2Q15029 972 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■■■■□ 20.1
NUCB1-201ENST00000405315 SF3B1O75533 1304 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■■■■ 57.9
NUCB1-201ENST00000405315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■■ 52.7
NUCB1-201ENST00000405315 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.182e-6■■□□□ 12.5
NUCB1-201ENST00000405315 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■□□□□ 10.6
NUCB1-201ENST00000405315 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.272e-6■■■■□ 24.2
NUCB1-201ENST00000405315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.962e-6■■□□□ 13.2
NUCB1-201ENST00000405315 IGF2BP3O00425 579 aaKnown RBP eCLIP15.5■□□□□ 0.073e-6■■□□□ 13.5
NUCB1-201ENST00000405315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.673e-6■■□□□ 13.5
NUCB1-201ENST00000405315 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.98□□□□□ -0.015e-6■■■■■ 26.8
NUCB1-201ENST00000405315 HNRNPLP14866 589 aaKnown RBP eCLIP14.79□□□□□ -0.045e-6■□□□□ 11.1
NUCB1-201ENST00000405315 SF3A3Q12874 501 aaKnown RBP eCLIP15.67■□□□□ 0.16e-6■□□□□ 10.9
NUCB1-201ENST00000405315 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.296e-6■□□□□ 11.1
NUCB1-201ENST00000405315 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.476e-6■■■■□ 21.3
NUCB1-201ENST00000405315 EIF3HO15372 352 aaKnown RBP eCLIP16.04■□□□□ 0.168e-6■□□□□ 10.6
NUCB1-201ENST00000405315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.021e-5■□□□□ 8.8
Retrieved 58 of 58 RNA–protein pairs in 11.2 ms