RNA–Protein interactions for RNA: ENST00000404743.8

LIPM-201, Transcript of lipase family member M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPM, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPM-201ENST00000404743 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
LIPM-201ENST00000404743 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
LIPM-201ENST00000404743 ABCC9O60706 1549 aa20.95■□□□□ 0.94
LIPM-201ENST00000404743 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
LIPM-201ENST00000404743 RB1CC1Q8TDY2 1594 aa19.98■□□□□ 0.79
LIPM-201ENST00000404743 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
LIPM-201ENST00000404743 NACADO15069 1562 aa19.85■□□□□ 0.77
LIPM-201ENST00000404743 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
LIPM-201ENST00000404743 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
LIPM-201ENST00000404743 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
LIPM-201ENST00000404743 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIPM-201ENST00000404743 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
LIPM-201ENST00000404743 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
LIPM-201ENST00000404743 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
LIPM-201ENST00000404743 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
LIPM-201ENST00000404743 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
LIPM-201ENST00000404743 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
LIPM-201ENST00000404743 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
LIPM-201ENST00000404743 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
LIPM-201ENST00000404743 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
LIPM-201ENST00000404743 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
LIPM-201ENST00000404743 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
LIPM-201ENST00000404743 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
LIPM-201ENST00000404743 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
LIPM-201ENST00000404743 SMARCA2P51531 1590 aa18.27■□□□□ 0.51
LIPM-201ENST00000404743 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
LIPM-201ENST00000404743 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
LIPM-201ENST00000404743 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
LIPM-201ENST00000404743 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
LIPM-201ENST00000404743 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
LIPM-201ENST00000404743 NESP48681 1621 aa18.04■□□□□ 0.48
LIPM-201ENST00000404743 WIZO95785 1651 aa17.99■□□□□ 0.47
LIPM-201ENST00000404743 CUX2O14529 1486 aa17.92■□□□□ 0.46
LIPM-201ENST00000404743 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
LIPM-201ENST00000404743 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
LIPM-201ENST00000404743 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.44
LIPM-201ENST00000404743 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
LIPM-201ENST00000404743 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
LIPM-201ENST00000404743 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
LIPM-201ENST00000404743 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
LIPM-201ENST00000404743 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
LIPM-201ENST00000404743 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.42
LIPM-201ENST00000404743 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
LIPM-201ENST00000404743 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
LIPM-201ENST00000404743 CFTRP13569 1480 aa17.6■□□□□ 0.41
LIPM-201ENST00000404743 WDR62O43379 1518 aa17.59■□□□□ 0.41
LIPM-201ENST00000404743 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
LIPM-201ENST00000404743 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
LIPM-201ENST00000404743 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
LIPM-201ENST00000404743 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
LIPM-201ENST00000404743 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
LIPM-201ENST00000404743 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
LIPM-201ENST00000404743 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
LIPM-201ENST00000404743 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
LIPM-201ENST00000404743 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
LIPM-201ENST00000404743 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
LIPM-201ENST00000404743 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
LIPM-201ENST00000404743 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
LIPM-201ENST00000404743 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
LIPM-201ENST00000404743 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
LIPM-201ENST00000404743 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
LIPM-201ENST00000404743 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIPM-201ENST00000404743 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
LIPM-201ENST00000404743 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
LIPM-201ENST00000404743 CUX1P39880 1505 aa17.06■□□□□ 0.32
LIPM-201ENST00000404743 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
LIPM-201ENST00000404743 SOGA1O94964 1423 aa17.03■□□□□ 0.32
LIPM-201ENST00000404743 CHD1O14646 1710 aa17.01■□□□□ 0.31
LIPM-201ENST00000404743 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
LIPM-201ENST00000404743 FBLN2P98095 1184 aa16.96■□□□□ 0.31
LIPM-201ENST00000404743 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
LIPM-201ENST00000404743 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
LIPM-201ENST00000404743 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
LIPM-201ENST00000404743 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
LIPM-201ENST00000404743 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
LIPM-201ENST00000404743 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
LIPM-201ENST00000404743 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
LIPM-201ENST00000404743 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
LIPM-201ENST00000404743 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
LIPM-201ENST00000404743 MAGI1Q96QZ7 1491 aaPredicted RBP16.85■□□□□ 0.29
LIPM-201ENST00000404743 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
LIPM-201ENST00000404743 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
LIPM-201ENST00000404743 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
LIPM-201ENST00000404743 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
LIPM-201ENST00000404743 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
LIPM-201ENST00000404743 TOP2BQ02880 1626 aa16.83■□□□□ 0.29
LIPM-201ENST00000404743 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
LIPM-201ENST00000404743 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
LIPM-201ENST00000404743 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.28
LIPM-201ENST00000404743 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
LIPM-201ENST00000404743 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
LIPM-201ENST00000404743 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
LIPM-201ENST00000404743 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
LIPM-201ENST00000404743 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
LIPM-201ENST00000404743 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
LIPM-201ENST00000404743 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
LIPM-201ENST00000404743 NUP160Q12769 1436 aa16.58■□□□□ 0.24
LIPM-201ENST00000404743 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
LIPM-201ENST00000404743 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
LIPM-201ENST00000404743 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms