RNA–Protein interactions for RNA: ENST00000402904.6

SCMH1-210, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-210ENST00000402904 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SCMH1-210ENST00000402904 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
SCMH1-210ENST00000402904 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
SCMH1-210ENST00000402904 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
SCMH1-210ENST00000402904 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
SCMH1-210ENST00000402904 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
SCMH1-210ENST00000402904 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
SCMH1-210ENST00000402904 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
SCMH1-210ENST00000402904 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
SCMH1-210ENST00000402904 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
SCMH1-210ENST00000402904 ABCC9O60706 1549 aa13.91□□□□□ -0.18
SCMH1-210ENST00000402904 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
SCMH1-210ENST00000402904 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
SCMH1-210ENST00000402904 NACADO15069 1562 aa13.78□□□□□ -0.2
SCMH1-210ENST00000402904 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.2
SCMH1-210ENST00000402904 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
SCMH1-210ENST00000402904 HRCP23327 699 aa13.67□□□□□ -0.22
SCMH1-210ENST00000402904 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
SCMH1-210ENST00000402904 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
SCMH1-210ENST00000402904 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
SCMH1-210ENST00000402904 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
SCMH1-210ENST00000402904 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SCMH1-210ENST00000402904 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
SCMH1-210ENST00000402904 WIZO95785 1651 aa13.49□□□□□ -0.25
SCMH1-210ENST00000402904 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
SCMH1-210ENST00000402904 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
SCMH1-210ENST00000402904 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
SCMH1-210ENST00000402904 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCMH1-210ENST00000402904 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
SCMH1-210ENST00000402904 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
SCMH1-210ENST00000402904 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
SCMH1-210ENST00000402904 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
SCMH1-210ENST00000402904 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
SCMH1-210ENST00000402904 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
SCMH1-210ENST00000402904 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
SCMH1-210ENST00000402904 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
SCMH1-210ENST00000402904 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
SCMH1-210ENST00000402904 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
SCMH1-210ENST00000402904 TTBK1Q5TCY1 1321 aaPredicted RBP13.1□□□□□ -0.31
SCMH1-210ENST00000402904 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
SCMH1-210ENST00000402904 SOGA1O94964 1423 aa13.07□□□□□ -0.32
SCMH1-210ENST00000402904 MYT1Q01538 1121 aa13.05□□□□□ -0.32
SCMH1-210ENST00000402904 EEA1Q15075 1411 aa13.04□□□□□ -0.32
SCMH1-210ENST00000402904 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
SCMH1-210ENST00000402904 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.32
SCMH1-210ENST00000402904 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
SCMH1-210ENST00000402904 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
SCMH1-210ENST00000402904 TNIKQ9UKE5 1360 aa13□□□□□ -0.33
SCMH1-210ENST00000402904 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
SCMH1-210ENST00000402904 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
SCMH1-210ENST00000402904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
SCMH1-210ENST00000402904 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
SCMH1-210ENST00000402904 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
SCMH1-210ENST00000402904 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-210ENST00000402904 APLP2Q06481 763 aa12.89□□□□□ -0.35
SCMH1-210ENST00000402904 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
SCMH1-210ENST00000402904 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
SCMH1-210ENST00000402904 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
SCMH1-210ENST00000402904 CLIP1P30622 1438 aa12.82□□□□□ -0.36
SCMH1-210ENST00000402904 KIF21BO75037 1637 aa12.79□□□□□ -0.36
SCMH1-210ENST00000402904 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
SCMH1-210ENST00000402904 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
SCMH1-210ENST00000402904 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
SCMH1-210ENST00000402904 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
SCMH1-210ENST00000402904 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
SCMH1-210ENST00000402904 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
SCMH1-210ENST00000402904 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
SCMH1-210ENST00000402904 BIVM-ERCC5R4GMW8 1640 aa12.67□□□□□ -0.38
SCMH1-210ENST00000402904 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
SCMH1-210ENST00000402904 CUX1P39880 1505 aa12.63□□□□□ -0.39
SCMH1-210ENST00000402904 CFTRP13569 1480 aa12.62□□□□□ -0.39
SCMH1-210ENST00000402904 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
SCMH1-210ENST00000402904 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
SCMH1-210ENST00000402904 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
SCMH1-210ENST00000402904 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
SCMH1-210ENST00000402904 CUX2O14529 1486 aa12.55□□□□□ -0.4
SCMH1-210ENST00000402904 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
SCMH1-210ENST00000402904 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
SCMH1-210ENST00000402904 ARAP1Q96P48 1450 aa12.52□□□□□ -0.4
SCMH1-210ENST00000402904 KANK4Q5T7N3 995 aaPredicted RBP12.51□□□□□ -0.41
SCMH1-210ENST00000402904 ITGAEP38570 1179 aa12.5□□□□□ -0.41
SCMH1-210ENST00000402904 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
SCMH1-210ENST00000402904 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
SCMH1-210ENST00000402904 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
SCMH1-210ENST00000402904 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
SCMH1-210ENST00000402904 IGF1RP08069 1367 aa12.46□□□□□ -0.41
SCMH1-210ENST00000402904 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
SCMH1-210ENST00000402904 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
SCMH1-210ENST00000402904 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
SCMH1-210ENST00000402904 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
SCMH1-210ENST00000402904 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
SCMH1-210ENST00000402904 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
SCMH1-210ENST00000402904 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
SCMH1-210ENST00000402904 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
SCMH1-210ENST00000402904 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
SCMH1-210ENST00000402904 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
SCMH1-210ENST00000402904 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
SCMH1-210ENST00000402904 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
SCMH1-210ENST00000402904 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
SCMH1-210ENST00000402904 MIER1Q8N108 512 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms