RNA–Protein interactions for RNA: ENST00000402752.5

RANBP1-202, Transcript of RAN binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RANBP1, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-202ENST00000402752 EIF4G2P78344 907 aaKnown RBP eCLIP35.72■■■■□ 3.312e-20■■■■■ 114.8
RANBP1-202ENST00000402752 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.05■■□□□ 1.448e-11■■■■■ 103.1
RANBP1-202ENST00000402752 GTF2F1P35269 517 aaKnown RBP eCLIP28.37■■■□□ 2.134e-11■■■■■ 88.5
RANBP1-202ENST00000402752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.54■■□□□ 1.842e-10■■■■■ 75.6
RANBP1-202ENST00000402752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.66■■■□□ 2.024e-16■■■■■ 72.4
RANBP1-202ENST00000402752 EWSR1Q01844 656 aaKnown RBP eCLIP18.78■□□□□ 0.63e-17■■■■■ 69.6
RANBP1-202ENST00000402752 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.2■■□□□ 1.469e-7■■■■■ 61.4
RANBP1-202ENST00000402752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.39■■□□□ 1.982e-6■■■■■ 55.9
RANBP1-202ENST00000402752 SF3B4Q15427 424 aaKnown RBP eCLIP23.25■■□□□ 1.319e-20■■■■■ 51.2
RANBP1-202ENST00000402752 FUSP35637 526 aaKnown RBP eCLIP17.26■□□□□ 0.359e-11■■■■■ 44.3
RANBP1-202ENST00000402752 EFTUD2Q15029 972 aaKnown RBP eCLIP24.36■■□□□ 1.491e-9■■■■■ 43.3
RANBP1-202ENST00000402752 TARDBPQ13148 414 aaKnown RBP eCLIP25.6■■□□□ 1.698e-7■■■■■ 40
RANBP1-202ENST00000402752 PCBP2Q15366 365 aaKnown RBP eCLIP24.04■■□□□ 1.447e-7■■■■■ 36.9
RANBP1-202ENST00000402752 TIA1P31483 386 aaKnown RBP eCLIP23.66■■□□□ 1.385e-9■■■■■ 36.9
RANBP1-202ENST00000402752 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.03■■□□□ 1.61e-10■■■■■ 35.3
RANBP1-202ENST00000402752 DDX21Q9NR30 783 aaKnown RBP eCLIP33.28■■■□□ 2.923e-6■■■■■ 34.3
RANBP1-202ENST00000402752 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.29■■□□□ 1.641e-7■■■■■ 34.3
RANBP1-202ENST00000402752 SUB1P53999 127 aaKnown RBP eCLIP19.26■□□□□ 0.674e-29■■■■■ 33.8
RANBP1-202ENST00000402752 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.32■■■□□ 2.449e-9■■■■■ 32.4
RANBP1-202ENST00000402752 AATFQ9NY61 560 aaKnown RBP eCLIP31.28■■■□□ 2.61e-45■■■■■ 31.9
RANBP1-202ENST00000402752 SF3B1O75533 1304 aaKnown RBP eCLIP28.01■■■□□ 2.072e-6■■■■■ 30.9
RANBP1-202ENST00000402752 PABPC4Q13310 644 aaKnown RBP eCLIP30.78■■■□□ 2.522e-31■■■■■ 29.6
RANBP1-202ENST00000402752 DKC1O60832 514 aaKnown RBP eCLIP28.73■■■□□ 2.191e-323■■■■■ 29.5
RANBP1-202ENST00000402752 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.73■■■□□ 2.199e-9■■■■■ 29.2
RANBP1-202ENST00000402752 DDX3XO00571 662 aaKnown RBP eCLIP26.27■■□□□ 1.82e-41■■■■■ 28.1
RANBP1-202ENST00000402752 AKAP1Q92667 903 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■■■■ 27.8
RANBP1-202ENST00000402752 RBM22Q9NW64 420 aaKnown RBP eCLIP25.77■■□□□ 1.723e-9■■■■■ 26.8
RANBP1-202ENST00000402752 RBFOX2O43251 390 aaKnown RBP eCLIP19.7■□□□□ 0.741e-8■■■■□ 26.1
RANBP1-202ENST00000402752 PRPF4O43172 522 aaKnown RBP eCLIP24.34■■□□□ 1.495e-7■■■■□ 26.1
RANBP1-202ENST00000402752 RBM5P52756 815 aaKnown RBP eCLIP31.86■■■□□ 2.691e-19■■■■□ 25.8
RANBP1-202ENST00000402752 FTOQ9C0B1 505 aaKnown RBP eCLIP29.2■■■□□ 2.262e-8■■■■□ 25.3
RANBP1-202ENST00000402752 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.69■■□□□ 1.064e-8■■■■□ 25.2
RANBP1-202ENST00000402752 SMNDC1O75940 238 aaKnown RBP eCLIP23.03■■□□□ 1.282e-10■■■■□ 25
RANBP1-202ENST00000402752 AARSP49588 968 aaKnown RBP eCLIP27.74■■■□□ 2.035e-7■■■■□ 24.8
RANBP1-202ENST00000402752 TIAL1Q01085 375 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■■□ 24.3
RANBP1-202ENST00000402752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.03■■■□□ 2.42e-7■■■■□ 23.8
RANBP1-202ENST00000402752 ZRANB2O95218 330 aaKnown RBP eCLIP25.65■■□□□ 1.74e-7■■■■□ 23.4
RANBP1-202ENST00000402752 CDC40O60508 579 aaKnown RBP eCLIP23.67■■□□□ 1.382e-6■■■■□ 23.1
RANBP1-202ENST00000402752 NCBP2P52298 156 aaKnown RBP eCLIP23.53■■□□□ 1.362e-6■■■■□ 22.6
RANBP1-202ENST00000402752 WRNQ14191 1432 aaPredicted RBP eCLIP44.96■■■■■ 4.791e-6■■■■□ 22.5
RANBP1-202ENST00000402752 TAF15Q92804 592 aaKnown RBP eCLIP21.06■□□□□ 0.962e-7■■■■□ 21.3
RANBP1-202ENST00000402752 AQRO60306 1485 aaKnown RBP eCLIP45.25■■■■■ 4.835e-9■■■■□ 20.9
RANBP1-202ENST00000402752 EIF3GO75821 320 aaKnown RBP eCLIP18.21■□□□□ 0.516e-8■■■■□ 20.9
RANBP1-202ENST00000402752 SF3A3Q12874 501 aaKnown RBP eCLIP22.83■■□□□ 1.252e-14■■■■□ 20.5
RANBP1-202ENST00000402752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.14■■■■□ 3.861e-9■■■■□ 20.2
RANBP1-202ENST00000402752 SAFB2Q14151 953 aaKnown RBP eCLIP37.2■■■■□ 3.556e-9■■■■□ 19.7
RANBP1-202ENST00000402752 NONOQ15233 471 aaKnown RBP eCLIP29.04■■■□□ 2.241e-7■■■■□ 19.3
RANBP1-202ENST00000402752 DDX42Q86XP3 938 aaKnown RBP eCLIP27.01■■□□□ 1.916e-7■■■□□ 19.2
RANBP1-202ENST00000402752 LSM11P83369 360 aaKnown RBP eCLIP22.31■■□□□ 1.169e-7■■■□□ 19.1
RANBP1-202ENST00000402752 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.02■■□□□ 1.763e-6■■■□□ 18.8
RANBP1-202ENST00000402752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.39■■■■■ 4.228e-11■■■□□ 18.5
RANBP1-202ENST00000402752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.36■■■■□ 3.894e-9■■■□□ 18.3
RANBP1-202ENST00000402752 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.26■□□□□ 0.993e-7■■■□□ 17.6
RANBP1-202ENST00000402752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.96■■■□□ 2.075e-8■■■□□ 17.3
RANBP1-202ENST00000402752 ZC3H11AO75152 810 aaKnown RBP eCLIP28.35■■■□□ 2.131e-6■■■□□ 17.1
RANBP1-202ENST00000402752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.42■■■□□ 2.463e-7■■■□□ 16.2
RANBP1-202ENST00000402752 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.96■■■□□ 2.232e-8■■■□□ 15.6
RANBP1-202ENST00000402752 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.35■■■□□ 2.293e-10■■■□□ 15.6
RANBP1-202ENST00000402752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.84■■□□□ 1.411e-7■■■□□ 14.9
RANBP1-202ENST00000402752 HNRNPMP52272 730 aaKnown RBP eCLIP40.53■■■■■ 4.083e-7■■■□□ 14.9
RANBP1-202ENST00000402752 KHSRPQ92945 711 aaKnown RBP eCLIP28.06■■■□□ 2.084e-8■■□□□ 14.2
RANBP1-202ENST00000402752 DDX6P26196 483 aaKnown RBP eCLIP27.26■■□□□ 1.958e-7■■□□□ 13.3
RANBP1-202ENST00000402752 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.66■■□□□ 1.387e-12■■□□□ 12.7
RANBP1-202ENST00000402752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.37■■■□□ 2.612e-14■■□□□ 12.7
RANBP1-202ENST00000402752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.16■■□□□ 1.783e-17■■□□□ 12.3
RANBP1-202ENST00000402752 AGGF1Q8N302 714 aaeCLIP24.83■■□□□ 1.572e-8■■□□□ 12.2
RANBP1-202ENST00000402752 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.53■■□□□ 1.849e-7■■□□□ 12
RANBP1-202ENST00000402752 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.3■■■■□ 3.723e-6■■□□□ 12
RANBP1-202ENST00000402752 TROVE2P10155 538 aaKnown RBP eCLIP22.75■■□□□ 1.232e-6■■□□□ 12
RANBP1-202ENST00000402752 LARP4Q71RC2 724 aaKnown RBP eCLIP23.43■■□□□ 1.347e-11■■□□□ 12
RANBP1-202ENST00000402752 SRSF7Q16629 238 aaKnown RBP eCLIP20.08■□□□□ 0.812e-6■■□□□ 11.9
RANBP1-202ENST00000402752 G3BP1Q13283 466 aaKnown RBP eCLIP31.75■■■□□ 2.678e-6■■□□□ 11.5
RANBP1-202ENST00000402752 CPSF6Q16630 551 aaKnown RBP eCLIP24.01■■□□□ 1.433e-7■□□□□ 11.2
RANBP1-202ENST00000402752 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.1■□□□□ 0.816e-9■□□□□ 11.2
RANBP1-202ENST00000402752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.57■■□□□ 1.841e-6■□□□□ 11.1
RANBP1-202ENST00000402752 RPS3P23396 243 aaKnown RBP eCLIP24.83■■□□□ 1.572e-29■□□□□ 11.1
RANBP1-202ENST00000402752 NOLC1Q14978 699 aaKnown RBP eCLIP28.04■■■□□ 2.081e-8■□□□□ 11
RANBP1-202ENST00000402752 GPKOWQ92917 476 aaPredicted RBP eCLIP29.54■■■□□ 2.324e-6■□□□□ 11
RANBP1-202ENST00000402752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.15■■■□□ 2.581e-6■□□□□ 10.8
RANBP1-202ENST00000402752 PUM1Q14671 1186 aaKnown RBP eCLIP26.45■■□□□ 1.821e-10■□□□□ 10.7
RANBP1-202ENST00000402752 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.97■■□□□ 1.911e-6■□□□□ 10.7
RANBP1-202ENST00000402752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.75■■■■□ 3.159e-11■□□□□ 10.7
RANBP1-202ENST00000402752 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.91■■□□□ 1.94e-7■□□□□ 10.5
RANBP1-202ENST00000402752 EIF3DO15371 548 aaKnown RBP eCLIP27.74■■■□□ 2.031e-8■□□□□ 10.3
RANBP1-202ENST00000402752 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.55■■□□□ 1.362e-8■□□□□ 10
RANBP1-202ENST00000402752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.24■■□□□ 1.799e-7■□□□□ 9.7
RANBP1-202ENST00000402752 YBX3P16989 372 aaKnown RBP eCLIP33.76■■■□□ 2.992e-33■□□□□ 9.3
RANBP1-202ENST00000402752 XRCC6P12956 609 aaKnown RBP eCLIP28.52■■■□□ 2.161e-10■□□□□ 8.7
RANBP1-202ENST00000402752 RBM15Q96T37 977 aaKnown RBP eCLIP25.62■■□□□ 1.691e-7■□□□□ 8.3
RANBP1-202ENST00000402752 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.75■■□□□ 1.552e-17■□□□□ 8.1
RANBP1-202ENST00000402752 HNRNPUQ00839 825 aaKnown RBP eCLIP32.43■■■□□ 2.788e-8■□□□□ 8.1
Retrieved 91 of 91 RNA–protein pairs in 21.3 ms