RNA–Protein interactions for RNA: ENST00000402182.7

APOBEC3B-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene APOBEC3B, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-203ENST00000402182 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
APOBEC3B-203ENST00000402182 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
APOBEC3B-203ENST00000402182 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
APOBEC3B-203ENST00000402182 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
APOBEC3B-203ENST00000402182 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
APOBEC3B-203ENST00000402182 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
APOBEC3B-203ENST00000402182 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
APOBEC3B-203ENST00000402182 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
APOBEC3B-203ENST00000402182 NACADO15069 1562 aa22.18■■□□□ 1.14
APOBEC3B-203ENST00000402182 ABCC9O60706 1549 aa22.18■■□□□ 1.14
APOBEC3B-203ENST00000402182 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
APOBEC3B-203ENST00000402182 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
APOBEC3B-203ENST00000402182 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
APOBEC3B-203ENST00000402182 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
APOBEC3B-203ENST00000402182 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
APOBEC3B-203ENST00000402182 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
APOBEC3B-203ENST00000402182 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
APOBEC3B-203ENST00000402182 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
APOBEC3B-203ENST00000402182 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
APOBEC3B-203ENST00000402182 WIZO95785 1651 aa21.33■■□□□ 1.01
APOBEC3B-203ENST00000402182 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
APOBEC3B-203ENST00000402182 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
APOBEC3B-203ENST00000402182 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
APOBEC3B-203ENST00000402182 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
APOBEC3B-203ENST00000402182 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
APOBEC3B-203ENST00000402182 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
APOBEC3B-203ENST00000402182 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
APOBEC3B-203ENST00000402182 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
APOBEC3B-203ENST00000402182 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
APOBEC3B-203ENST00000402182 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
APOBEC3B-203ENST00000402182 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
APOBEC3B-203ENST00000402182 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
APOBEC3B-203ENST00000402182 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
APOBEC3B-203ENST00000402182 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
APOBEC3B-203ENST00000402182 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.89
APOBEC3B-203ENST00000402182 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
APOBEC3B-203ENST00000402182 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
APOBEC3B-203ENST00000402182 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
APOBEC3B-203ENST00000402182 EEA1Q15075 1411 aa20.47■□□□□ 0.87
APOBEC3B-203ENST00000402182 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
APOBEC3B-203ENST00000402182 HRCP23327 699 aa20.43■□□□□ 0.86
APOBEC3B-203ENST00000402182 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.86
APOBEC3B-203ENST00000402182 SOGA1O94964 1423 aa20.38■□□□□ 0.85
APOBEC3B-203ENST00000402182 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
APOBEC3B-203ENST00000402182 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
APOBEC3B-203ENST00000402182 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
APOBEC3B-203ENST00000402182 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
APOBEC3B-203ENST00000402182 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
APOBEC3B-203ENST00000402182 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
APOBEC3B-203ENST00000402182 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
APOBEC3B-203ENST00000402182 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
APOBEC3B-203ENST00000402182 CFTRP13569 1480 aa20.17■□□□□ 0.82
APOBEC3B-203ENST00000402182 KIF21BO75037 1637 aa20.16■□□□□ 0.82
APOBEC3B-203ENST00000402182 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
APOBEC3B-203ENST00000402182 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
APOBEC3B-203ENST00000402182 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
APOBEC3B-203ENST00000402182 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
APOBEC3B-203ENST00000402182 CUX1P39880 1505 aa20.03■□□□□ 0.8
APOBEC3B-203ENST00000402182 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
APOBEC3B-203ENST00000402182 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
APOBEC3B-203ENST00000402182 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
APOBEC3B-203ENST00000402182 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
APOBEC3B-203ENST00000402182 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
APOBEC3B-203ENST00000402182 CLIP1P30622 1438 aa19.9■□□□□ 0.78
APOBEC3B-203ENST00000402182 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
APOBEC3B-203ENST00000402182 PRXQ9BXM0 1461 aa19.89■□□□□ 0.78
APOBEC3B-203ENST00000402182 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
APOBEC3B-203ENST00000402182 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
APOBEC3B-203ENST00000402182 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
APOBEC3B-203ENST00000402182 CUX2O14529 1486 aa19.72■□□□□ 0.75
APOBEC3B-203ENST00000402182 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
APOBEC3B-203ENST00000402182 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
APOBEC3B-203ENST00000402182 TTBK1Q5TCY1 1321 aaPredicted RBP19.67■□□□□ 0.74
APOBEC3B-203ENST00000402182 IGF1RP08069 1367 aa19.65■□□□□ 0.74
APOBEC3B-203ENST00000402182 NESP48681 1621 aa19.64■□□□□ 0.73
APOBEC3B-203ENST00000402182 APLP2Q06481 763 aa19.64■□□□□ 0.73
APOBEC3B-203ENST00000402182 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
APOBEC3B-203ENST00000402182 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
APOBEC3B-203ENST00000402182 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
APOBEC3B-203ENST00000402182 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.72
APOBEC3B-203ENST00000402182 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.72
APOBEC3B-203ENST00000402182 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
APOBEC3B-203ENST00000402182 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
APOBEC3B-203ENST00000402182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
APOBEC3B-203ENST00000402182 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
APOBEC3B-203ENST00000402182 ARHGAP35Q9NRY4 1499 aa19.52■□□□□ 0.72
APOBEC3B-203ENST00000402182 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
APOBEC3B-203ENST00000402182 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
APOBEC3B-203ENST00000402182 CUL7Q14999 1698 aa19.47■□□□□ 0.71
APOBEC3B-203ENST00000402182 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
APOBEC3B-203ENST00000402182 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
APOBEC3B-203ENST00000402182 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
APOBEC3B-203ENST00000402182 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
APOBEC3B-203ENST00000402182 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
APOBEC3B-203ENST00000402182 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
APOBEC3B-203ENST00000402182 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
APOBEC3B-203ENST00000402182 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
APOBEC3B-203ENST00000402182 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
APOBEC3B-203ENST00000402182 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
APOBEC3B-203ENST00000402182 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms