RNA–Protein interactions for RNA: ENST00000401813.7

FAAP20-205, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-205ENST00000401813 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
FAAP20-205ENST00000401813 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
FAAP20-205ENST00000401813 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
FAAP20-205ENST00000401813 CCDC180Q9P1Z9 1646 aa32.54■■■□□ 2.8
FAAP20-205ENST00000401813 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
FAAP20-205ENST00000401813 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
FAAP20-205ENST00000401813 HRCP23327 699 aa31.99■■■□□ 2.71
FAAP20-205ENST00000401813 CHIC1Q5VXU3 224 aa31.95■■■□□ 2.71
FAAP20-205ENST00000401813 PCGF6Q9BYE7 350 aa31.58■■■□□ 2.65
FAAP20-205ENST00000401813 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
FAAP20-205ENST00000401813 PPARGC1BQ86YN6 1023 aaKnown RBP31.27■■■□□ 2.6
FAAP20-205ENST00000401813 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
FAAP20-205ENST00000401813 LOC105371045A0A1W2PR82 267 aa31.07■■■□□ 2.56
FAAP20-205ENST00000401813 TRIM26Q12899 539 aaPredicted RBP30.82■■■□□ 2.52
FAAP20-205ENST00000401813 ABCC9O60706 1549 aa30.61■■■□□ 2.49
FAAP20-205ENST00000401813 ZEB1P37275 1124 aaPredicted RBP30.39■■■□□ 2.46
FAAP20-205ENST00000401813 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
FAAP20-205ENST00000401813 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
FAAP20-205ENST00000401813 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
FAAP20-205ENST00000401813 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
FAAP20-205ENST00000401813 NACADO15069 1562 aa30.14■■■□□ 2.42
FAAP20-205ENST00000401813 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
FAAP20-205ENST00000401813 PELP1Q8IZL8 1130 aaKnown RBP29.91■■■□□ 2.38
FAAP20-205ENST00000401813 SCAF1Q9H7N4 1312 aaKnown RBP29.87■■■□□ 2.37
FAAP20-205ENST00000401813 EHMT2Q96KQ7 1210 aa29.86■■■□□ 2.37
FAAP20-205ENST00000401813 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
FAAP20-205ENST00000401813 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
FAAP20-205ENST00000401813 WIZO95785 1651 aa29.53■■■□□ 2.32
FAAP20-205ENST00000401813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.5■■■□□ 2.31
FAAP20-205ENST00000401813 CCER1Q8TC90 406 aaPredicted RBP29.44■■■□□ 2.3
FAAP20-205ENST00000401813 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
FAAP20-205ENST00000401813 ACIN1Q9UKV3 1341 aaKnown RBP29.37■■■□□ 2.29
FAAP20-205ENST00000401813 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
FAAP20-205ENST00000401813 NEUROD1Q13562 356 aa29.29■■■□□ 2.28
FAAP20-205ENST00000401813 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
FAAP20-205ENST00000401813 DIEXFQ68CQ4 756 aaKnown RBP29.2■■■□□ 2.27
FAAP20-205ENST00000401813 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
FAAP20-205ENST00000401813 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
FAAP20-205ENST00000401813 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
FAAP20-205ENST00000401813 CENPBP07199 599 aaPredicted RBP29.08■■■□□ 2.25
FAAP20-205ENST00000401813 CEP162Q5TB80 1403 aa29.07■■■□□ 2.24
FAAP20-205ENST00000401813 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
FAAP20-205ENST00000401813 GTF3C3Q9Y5Q9 886 aa29.05■■■□□ 2.24
FAAP20-205ENST00000401813 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
FAAP20-205ENST00000401813 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
FAAP20-205ENST00000401813 SMARCA4P51532 1647 aa28.96■■■□□ 2.23
FAAP20-205ENST00000401813 SOGA1O94964 1423 aa28.94■■■□□ 2.22
FAAP20-205ENST00000401813 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
FAAP20-205ENST00000401813 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
FAAP20-205ENST00000401813 ZNF316A6NFI3 1004 aaPredicted RBP28.83■■■□□ 2.21
FAAP20-205ENST00000401813 EEA1Q15075 1411 aa28.82■■■□□ 2.2
FAAP20-205ENST00000401813 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
FAAP20-205ENST00000401813 RUSC2Q8N2Y8 1516 aa28.78■■■□□ 2.2
FAAP20-205ENST00000401813 UBTFP17480 764 aaKnown RBP28.76■■■□□ 2.19
FAAP20-205ENST00000401813 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
FAAP20-205ENST00000401813 GOLGA3Q08378 1498 aa28.69■■■□□ 2.18
FAAP20-205ENST00000401813 YTHDC1Q96MU7 727 aaKnown RBP28.57■■■□□ 2.16
FAAP20-205ENST00000401813 MYT1Q01538 1121 aa28.55■■■□□ 2.16
FAAP20-205ENST00000401813 MIER1Q8N108 512 aa28.51■■■□□ 2.15
FAAP20-205ENST00000401813 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
FAAP20-205ENST00000401813 HNRNPUL2Q1KMD3 747 aaKnown RBP28.5■■■□□ 2.15
FAAP20-205ENST00000401813 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
FAAP20-205ENST00000401813 KIF21BO75037 1637 aa28.43■■■□□ 2.14
FAAP20-205ENST00000401813 CLIP1P30622 1438 aa28.4■■■□□ 2.14
FAAP20-205ENST00000401813 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
FAAP20-205ENST00000401813 VPS8Q8N3P4 1428 aa28.35■■■□□ 2.13
FAAP20-205ENST00000401813 ATAD2BQ9ULI0 1458 aa28.28■■■□□ 2.12
FAAP20-205ENST00000401813 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
FAAP20-205ENST00000401813 APLP2Q06481 763 aa28.23■■■□□ 2.11
FAAP20-205ENST00000401813 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.1
FAAP20-205ENST00000401813 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.08
FAAP20-205ENST00000401813 CLSPNQ9HAW4 1339 aa28.05■■■□□ 2.08
FAAP20-205ENST00000401813 DHX57Q6P158 1386 aaKnown RBP28.02■■■□□ 2.08
FAAP20-205ENST00000401813 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
FAAP20-205ENST00000401813 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
FAAP20-205ENST00000401813 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
FAAP20-205ENST00000401813 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
FAAP20-205ENST00000401813 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
FAAP20-205ENST00000401813 KANK4Q5T7N3 995 aaPredicted RBP27.84■■■□□ 2.05
FAAP20-205ENST00000401813 SUPT16HQ9Y5B9 1047 aaKnown RBP27.84■■■□□ 2.05
FAAP20-205ENST00000401813 PRXQ9BXM0 1461 aa27.83■■■□□ 2.04
FAAP20-205ENST00000401813 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
FAAP20-205ENST00000401813 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
FAAP20-205ENST00000401813 CUX2O14529 1486 aa27.71■■■□□ 2.03
FAAP20-205ENST00000401813 CCNB3Q8WWL7 1395 aa27.63■■■□□ 2.01
FAAP20-205ENST00000401813 CUX1P39880 1505 aa27.56■■■□□ 2
FAAP20-205ENST00000401813 KIF27Q86VH2 1401 aa27.55■■■□□ 2
FAAP20-205ENST00000401813 TSHZ2Q9NRE2 1034 aa27.55■■■□□ 2
FAAP20-205ENST00000401813 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
FAAP20-205ENST00000401813 ITGAEP38570 1179 aa27.52■■■□□ 2
FAAP20-205ENST00000401813 CFTRP13569 1480 aa27.49■■□□□ 1.99
FAAP20-205ENST00000401813 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
FAAP20-205ENST00000401813 RAB3GAP2Q9H2M9 1393 aa27.48■■□□□ 1.99
FAAP20-205ENST00000401813 MAPKBP1O60336 1514 aa27.47■■□□□ 1.99
FAAP20-205ENST00000401813 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
FAAP20-205ENST00000401813 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
FAAP20-205ENST00000401813 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.97
FAAP20-205ENST00000401813 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
FAAP20-205ENST00000401813 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
FAAP20-205ENST00000401813 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms