RNA–Protein interactions for RNA: ENST00000401722.7

SLC25A3-203, Transcript of solute carrier family 25 member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC25A3, Length 6,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-203ENST00000401722 DKC1O60832 514 aaKnown RBP eCLIP12.76□□□□□ -0.371e-323■■■■■ 205.3
SLC25A3-203ENST00000401722 SUB1P53999 127 aaKnown RBP eCLIP10.4□□□□□ -0.754e-7■■■■■ 74.1
SLC25A3-203ENST00000401722 NIP7Q9Y221 180 aaKnown RBP eCLIP13.2□□□□□ -0.32e-18■■■■■ 63.2
SLC25A3-203ENST00000401722 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.189e-10■■■■■ 45.4
SLC25A3-203ENST00000401722 EFTUD2Q15029 972 aaKnown RBP eCLIP12.05□□□□□ -0.484e-10■■■■■ 43.2
SLC25A3-203ENST00000401722 TIA1P31483 386 aaKnown RBP eCLIP10.93□□□□□ -0.662e-11■■■■■ 42.9
SLC25A3-203ENST00000401722 RPS3P23396 243 aaKnown RBP eCLIP10.76□□□□□ -0.692e-7■■■■■ 33.3
SLC25A3-203ENST00000401722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■■ 29.3
SLC25A3-203ENST00000401722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.07□□□□□ -0.647e-8■■■■■ 28.6
SLC25A3-203ENST00000401722 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.51e-7■■■■■ 27.7
SLC25A3-203ENST00000401722 NOLC1Q14978 699 aaKnown RBP eCLIP12.74□□□□□ -0.374e-8■■■■□ 25.9
SLC25A3-203ENST00000401722 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.531e-7■■■■□ 25.6
SLC25A3-203ENST00000401722 RBM22Q9NW64 420 aaKnown RBP eCLIP11.75□□□□□ -0.536e-16■■■■□ 24.1
SLC25A3-203ENST00000401722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.039e-8■■■■□ 23.6
SLC25A3-203ENST00000401722 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.687e-7■■■■□ 23
SLC25A3-203ENST00000401722 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.341e-51■■■■□ 22.2
SLC25A3-203ENST00000401722 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.43e-14■■■■□ 21.5
SLC25A3-203ENST00000401722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■■■□ 20.9
SLC25A3-203ENST00000401722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.362e-38■■■■□ 20.2
SLC25A3-203ENST00000401722 PUM1Q14671 1186 aaKnown RBP eCLIP11.23□□□□□ -0.612e-8■■■■□ 19.4
SLC25A3-203ENST00000401722 DDX3XO00571 662 aaKnown RBP eCLIP11.55□□□□□ -0.566e-30■■■□□ 18.1
SLC25A3-203ENST00000401722 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.42□□□□□ -0.741e-8■■■□□ 16.4
SLC25A3-203ENST00000401722 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.388e-28■■■□□ 16.2
SLC25A3-203ENST00000401722 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.724e-8■■■□□ 15.9
SLC25A3-203ENST00000401722 NIPBLQ6KC79 2804 aaeCLIP5.6□□□□□ -1.513e-9■■■□□ 14.9
SLC25A3-203ENST00000401722 IGF2BP3O00425 579 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■□□□ 14.5
SLC25A3-203ENST00000401722 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.62e-23■■□□□ 14.4
SLC25A3-203ENST00000401722 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.122e-87■■□□□ 14.2
SLC25A3-203ENST00000401722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.56□□□□□ -0.561e-7■■□□□ 14.2
SLC25A3-203ENST00000401722 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.442e-12■■□□□ 13.8
SLC25A3-203ENST00000401722 QKIQ96PU8 341 aaKnown RBP eCLIP11.36□□□□□ -0.591e-11■■□□□ 13.5
SLC25A3-203ENST00000401722 ZC3H11AO75152 810 aaKnown RBP eCLIP11.98□□□□□ -0.498e-10■■□□□ 13.1
SLC25A3-203ENST00000401722 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.511e-11■■□□□ 12.9
SLC25A3-203ENST00000401722 PTBP1P26599 531 aaKnown RBP eCLIP10.16□□□□□ -0.783e-16■■□□□ 12
SLC25A3-203ENST00000401722 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.526e-6■■□□□ 11.7
SLC25A3-203ENST00000401722 EIF3HO15372 352 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■□□□ 11.6
SLC25A3-203ENST00000401722 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.02□□□□□ -0.484e-12■■□□□ 11.5
SLC25A3-203ENST00000401722 SND1Q7KZF4 910 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■□□□□ 11.2
SLC25A3-203ENST00000401722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.43□□□□□ -0.589e-11■□□□□ 10.4
SLC25A3-203ENST00000401722 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.389e-18■□□□□ 10.1
SLC25A3-203ENST00000401722 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.392e-19■□□□□ 10
SLC25A3-203ENST00000401722 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.171e-7■□□□□ 9.8
SLC25A3-203ENST00000401722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.32□□□□□ -0.445e-19■□□□□ 9.5
SLC25A3-203ENST00000401722 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.99□□□□□ -0.653e-11■□□□□ 9.4
SLC25A3-203ENST00000401722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.397e-8■□□□□ 9.2
SLC25A3-203ENST00000401722 LARP4Q71RC2 724 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■□□□□ 9.1
SLC25A3-203ENST00000401722 NCBP2P52298 156 aaKnown RBP eCLIP11.26□□□□□ -0.615e-8■□□□□ 9.1
SLC25A3-203ENST00000401722 FUSP35637 526 aaKnown RBP eCLIP8.76□□□□□ -1.018e-8■□□□□ 9
SLC25A3-203ENST00000401722 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.89□□□□□ -0.671e-31■□□□□ 8.9
SLC25A3-203ENST00000401722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.34□□□□□ -0.433e-6■□□□□ 8.9
SLC25A3-203ENST00000401722 ZRANB2O95218 330 aaKnown RBP eCLIP12.14□□□□□ -0.476e-7■□□□□ 8.7
SLC25A3-203ENST00000401722 U2AF1Q01081 240 aaKnown RBP eCLIP14.55□□□□□ -0.087e-9■□□□□ 8.6
SLC25A3-203ENST00000401722 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.367e-15■□□□□ 8.3
SLC25A3-203ENST00000401722 ILF3Q12906 894 aaKnown RBP eCLIP11.38□□□□□ -0.596e-10■□□□□ 8.2
Retrieved 54 of 54 RNA–protein pairs in 13.9 ms